Transcript Information: S_Transcript_63010.p1


Annotated TAIR IDAT5G46860.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)VAM3, ATVAM3, SYP22, ATSYP22, SGR3
Annotation TypeOrtholog
Chromosome Positionchr5:19012342-19013795 | Reverse length=268
E-Value1.8E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.609320320861
Replicate 257.752596194671
Replicate 351.910877741193
Condition 2: 8 Hour
Replicate 155.696901769453
Replicate 256.324418928253
Replicate 349.15183683031
Condition 3: 24 Hour
Replicate 151.399725860222
Replicate 248.260587003752
Replicate 352.447015865933


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63010.p1 GENE.S_Transcript_63010~~S_Transcript_63010.p1 ORF type:5prime_partial len:340 (+),score=70.99,Syntaxin_2|PF14523.2|3e-34,Syntaxin_2|PF14523.2|2.1e+02,SNARE|PF05739.15|1e+04,SNARE|PF05739.15|2.8e-16,Syntaxin|PF00804.21|2.5e-05 S_Transcript_63010:1-1020(+)
CTAAAAACCAAAACCTTTGAAGTTTCAGTCAAACAAACACGGAGCCCATTCCCATTCCTATTCCTGTTCCCATTTCCTTCTACCTTTCTCTCTCATATTAACCCCTCATCATCAGTTTTGATCTTTTCTTCTTCCCAGATCCCGAGACAAAGGGGTTGGTTGAAAGGAGGAGGGGCAAAAGAGAAGAAGAAGATGAGCTTCCAAGATCTGGAAGCAGGAGGGAGAAGGCCATTGGCATCAAGGAGGGACTTGATCAATGCAAAGCAAGACCCAACTCAGGCTGTAGCTTCTGGTATTTTCCAGATCAACACTGCTGTCTCTACTTTTCAGCGCCTCGTTAATACCCTTGGTACCCCTAAGGACACTCCTGACCTTCGTCAGAAGCTCCACAAGACCAGGTTGCACATTGGGCAATTAGTGAAGGACACATCAGCTAAACTCAAGCAAGCAAGTGACTCTGATCATGGTACTAATGTCAGTGCCAGCAAGAAGATTGCTGATGCTAAGCTTGCCAAAGATTTCCAACAAGTTTTAAAAGATTTTCAAAAGGCTCAACGTCTAGCAGCTGAGAGGGAAACTGCATATACCCCTTTTGTTCCCCAGGCTGTTCTTCCTTCAAGCTACACGGCTAGTGAGATAGACTTAAGTTCAGACAAGACGCAGGAGCAGCGTGCTCTTCTTGTGGAATCTAGAAGGCAAGACGTGTTACTGTTGGACAATGAGATATCCTTTAATGAAGCTGTAATCGAGGAAAGAGACCAGGGAATACAGGAAATCCAGAATCAAATTGGCGAGGTGAATGAGATCTTCAAGGATCTTGCCGTTCTTGTCCACGATCAAGGAACTATGATTGATGATATAGGCTCCCATATCGAGAATGCCAATGCTGCAACTGCCCAGGGAAGATCGCAACTTGCCAAGGCCGCAAAGAGCCAAAGATCAAATTCATCTCTGACCTGCTTGCTTGTGGTGATATTCGGAATCATACTTCTGATTGTTCTAATCATCATCGTCGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63010.p1 GENE.S_Transcript_63010~~S_Transcript_63010.p1 ORF type:5prime_partial len:340 (+),score=70.99,Syntaxin_2|PF14523.2|3e-34,Syntaxin_2|PF14523.2|2.1e+02,SNARE|PF05739.15|1e+04,SNARE|PF05739.15|2.8e-16,Syntaxin|PF00804.21|2.5e-05 S_Transcript_63010:1-1020(+)
LKTKTFEVSVKQTRSPFPFLFLFPFPSTFLSHINPSSSVLIFSSSQIPRQRGWLKGGGAKEKKKMSFQDLEAGGRRPLASRRDLINAKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPDLRQKLHKTRLHIGQLVKDTSAKLKQASDSDHGTNVSASKKIADAKLAKDFQQVLKDFQKAQRLAAERETAYTPFVPQAVLPSSYTASEIDLSSDKTQEQRALLVESRRQDVLLLDNEISFNEAVIEERDQGIQEIQNQIGEVNEIFKDLAVLVHDQGTMIDDIGSHIENANAATAQGRSQLAKAAKSQRSNSSLTCLLVVIFGIILLIVLIIIVA*

Click here to download the sequence:
Link to NCBI Protein BLAST