Transcript Information: S_Transcript_63031.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5695311537416
Replicate 21.3694145242595
Replicate 32.2894431000332
Condition 2: 8 Hour
Replicate 11.911931545674
Replicate 22.9314836148607
Replicate 31.6170643010676
Condition 3: 24 Hour
Replicate 12.7117786402117
Replicate 21.2504171904192
Replicate 34.1746832118813


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63031.p1 GENE.S_Transcript_63031~~S_Transcript_63031.p1 ORF type:5prime_partial len:145 (+),score=7.36,zf-RVT|PF13966.2|8.1e-08,zf-RVT|PF13966.2|1.6e+03 S_Transcript_63031:3-437(+)
GTGTGGCAACGTCGGCGACCTCAGTGGAATCTTTCGCCTGATATGTGCCTCATGTGTCATAGGAGTGGGGAGACAGCCTCTCACCTTTTTCTCCATTGTCCTGTTGCACGTTCTGTGTGGGCTAAGCTCTTTGATGTACTGGGGGAAGCCTTCGTTTGTCCGGCCACTGTTTTGGAGTTCCTGGAGGTCAGCTTTTGGGGGTTTGGTAGGGACAAGGAGTTACGTGTGTTATGGCGAAATGCAATCTTTGCTACTCTTTGGTGTATTTGGCTGGAGCGCAATGCAAGGGTGTTTCAACGGGTTGTTACCTCTACCTCTCTTATGTGGGATCGGATCACCTACTTAGCATCTTTGTGGAGTAAAGCTAGCGGGGCGTTTCGTAGTTATTCTTTATCTGATGTACAACGTAACTGGTCTTGTTTGTATTTGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63031.p1 GENE.S_Transcript_63031~~S_Transcript_63031.p1 ORF type:5prime_partial len:145 (+),score=7.36,zf-RVT|PF13966.2|8.1e-08,zf-RVT|PF13966.2|1.6e+03 S_Transcript_63031:3-437(+)
VWQRRRPQWNLSPDMCLMCHRSGETASHLFLHCPVARSVWAKLFDVLGEAFVCPATVLEFLEVSFWGFGRDKELRVLWRNAIFATLWCIWLERNARVFQRVVTSTSLMWDRITYLASLWSKASGAFRSYSLSDVQRNWSCLYLR*

Click here to download the sequence:
Link to NCBI Protein BLAST