Transcript Information: S_Transcript_63035.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16342807079641
Replicate 30.13661285987852
Condition 2: 8 Hour
Replicate 10.31593170840197
Replicate 20.66286958932523
Replicate 30.63158066977723
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20.16788008575072
Replicate 30.56048987566925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63035.p1 GENE.S_Transcript_63035~~S_Transcript_63035.p1 ORF type:5prime_partial len:135 (+),score=9.45,zf-RVT|PF13966.2|1.8e-07,zf-RVT|PF13966.2|8.5e+03 S_Transcript_63035:3-407(+)
GTGTGGCAACGTCGGCGACCTCAGTGGAATCTTTCGCCTGATATGTGCCTCATGTGTCATAGGAGTGGGGAGACAGCCTCTCACCTTTTTCTCCATTGTCCTGTGGCACGTGTTGTTTGGACTAGGCTCTTTTACATACGGGGGGAAGCCTTTGTTTGTCCATCCACTGTTTTGGAGTTCCTGGAGATCTACTTTTGGGGATTTGGTAGGGATAAGGAGCTGGGTGTGTTATGGCGTAATGCAATCTTTGCTACTCTGTGTAGTATTTGGTTGGAGCGCAATGCAAGGGTGTTTAAACAGATTGCTCTCCCTACCTCTCTTATGTGGGATCGGATCACCTACTTAGCATCCTTGTGGAGTAAAGCTAGTGGGGCGTTTCGTAGTTATTCTTTATCTGATATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63035.p1 GENE.S_Transcript_63035~~S_Transcript_63035.p1 ORF type:5prime_partial len:135 (+),score=9.45,zf-RVT|PF13966.2|1.8e-07,zf-RVT|PF13966.2|8.5e+03 S_Transcript_63035:3-407(+)
VWQRRRPQWNLSPDMCLMCHRSGETASHLFLHCPVARVVWTRLFYIRGEAFVCPSTVLEFLEIYFWGFGRDKELGVLWRNAIFATLCSIWLERNARVFKQIALPTSLMWDRITYLASLWSKASGAFRSYSLSDI*

Click here to download the sequence:
Link to NCBI Protein BLAST