Transcript Information: S_Transcript_63333.p1


Annotated TAIR IDAT5G50915.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20710764-20712252 | Reverse length=286
E-Value7E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2796003842784
Replicate 210.112111880528
Replicate 39.067678574437
Condition 2: 8 Hour
Replicate 15.9237195325369
Replicate 24.0393615599506
Replicate 35.3881725890369
Condition 3: 24 Hour
Replicate 16.9175464386881
Replicate 25.6029978619303
Replicate 35.2545925843992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63333.p1 GENE.S_Transcript_63333~~S_Transcript_63333.p1 ORF type:5prime_partial len:360 (+),score=74.80,HLH|PF00010.22|1.2e-06 S_Transcript_63333:3-1082(+)
AATATTGTATTTTGGGTTTTTCTATCTCCCTGCAATCTTTATATATACCCTGACCTGACTCCCCCTCCCCTGCTTTCTATCAACTCCTCACCTTTCTCTCTGTCTTGTGAATTTCTTCTTCTCTGCCATCATTCATTTTTTTCTCAAGGACTTCCTTTTTGTACAACACAAAGTATCAAATTCAAAGCTCTTAATACAAAAATAATGGCAGCTTTTTCATACCAGGACCCTCCTTTCATTGTTGAGTCTGTTAATTATTTACCCATCAAAAGCCCTGTTCTTCTGGCTCATCATAATGATGGTGAATTCTACCCCAACATGAATCATCAAGTTGAATTTGGTGATGCCAGTACTCCTCATGAAAGCAGCTGTGTTGAGCAGCAAAGTATTCATAATAATAATTCTCAGAATGAGCCGCCTTCAGTGACTCAAAACCAGAGAACTGACCAAAGCTTCATATCAATGGTGGATAAAGCTGATAGTGGTGAGCAAGTGTCTCAGAATTCTTCACTTCATAACAAGAGGAAATCTAGATATGGATCTTCCCCTAATTCTGCTACTTCCAAGGATGTGAGACAAGTGAAGTGCAAGAAGCAGAAAAGAGAGAAAGAAGGAACCAAGGTTGAGAAAATTGACAAAAAGGATGAAAATGAAGAACCACCAAAAGGGTACATTCATGTGAGAGCAAGAAGGGGTCAAGCCACAGATAGTCACAGCCTTGCTGAAAGGGTAAGGAGAGAGAAAATCAGTGCAAGGATGAAAATGTTACAAGCTCTGGTTCCTGGTTGTGACAAGGTTACCGGGAAGGCCCTCATGTTGGATGAAATTATCAATTACATCCAATCCTTGCAAAATCAAGTAGAGTTCTTGTCAATGAAGCTTGCTTCTTTGGACCCGATGGTCTACACCTTTGAACTAATGGATCTTGATCTGATGGCATTCGGAACAGAGGGGATGAGCAATAGCATGGCATTACCAATGCCACTAATTCAATCCACCACCACCAGCAGCAGCGGCGGAACTAGTCAGCCCATCGCTTTTCCCGACACAAACACAATAACCAGTCCCCACCGCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63333.p1 GENE.S_Transcript_63333~~S_Transcript_63333.p1 ORF type:5prime_partial len:360 (+),score=74.80,HLH|PF00010.22|1.2e-06 S_Transcript_63333:3-1082(+)
NIVFWVFLSPCNLYIYPDLTPPPLLSINSSPFSLSCEFLLLCHHSFFSQGLPFCTTQSIKFKALNTKIMAAFSYQDPPFIVESVNYLPIKSPVLLAHHNDGEFYPNMNHQVEFGDASTPHESSCVEQQSIHNNNSQNEPPSVTQNQRTDQSFISMVDKADSGEQVSQNSSLHNKRKSRYGSSPNSATSKDVRQVKCKKQKREKEGTKVEKIDKKDENEEPPKGYIHVRARRGQATDSHSLAERVRREKISARMKMLQALVPGCDKVTGKALMLDEIINYIQSLQNQVEFLSMKLASLDPMVYTFELMDLDLMAFGTEGMSNSMALPMPLIQSTTTSSSGGTSQPIAFPDTNTITSPHRY*

Click here to download the sequence:
Link to NCBI Protein BLAST