Transcript Information: S_Transcript_63339.p1


Annotated TAIR IDAT5G49660.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20161401-20164534 | Reverse length=966
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15103859951862
Replicate 20.82641549988421
Replicate 30.75361918162273
Condition 2: 8 Hour
Replicate 11.5491770491447
Replicate 20.93956685547092
Replicate 32.395310911343
Condition 3: 24 Hour
Replicate 11.4877332683719
Replicate 21.3119800117976
Replicate 31.6891039953483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63339.p1 GENE.S_Transcript_63339~~S_Transcript_63339.p1 ORF type:complete len:881 (+),score=112.01,Pkinase|PF00069.21|3e-35,LRR_8|PF13855.2|0.043,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0081,LRR_8|PF13855.2|1.7e-05,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|0.46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|1.8e-05,Pkinase_Tyr|PF07714.13|1.5e-24,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.0023,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0052,LRR_4|PF12799.3|18,LRR_4|PF12799.3|13,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|5.1,LRR_4|PF12799.3|78,LRR_1|PF00560.29|28,LRR_1|PF00560.29|22,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|7.9e+02,LRR_1|PF00560.29|3.6e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|41,LRR_1|PF00560.29|14,LRR_1|PF00560.29|1.5e+03 S_Transcript_63339:369-3011(+)
ATGGCGCTCCAATTTATCTGTTTATCTTCTTTCCTATTATTTCTTTCCCTCCTTAACCCTCTCCAAGCCACAAATGATAAGCAGTCTCAATATTTCAGCCTCATGAAAAGATCTCTCTCAGGTAACACCTGGTCTGACTGGAGCGCCAAGGGAGAGAATTCATATTGTAACTACACTGGAGTTGCATGCAATATTCAAGGGCAGGTCACCAAGGTTAATATTTCAGGATGGTCGCTAGAAGGCTCATTTCCACCAGACGTGTGCTCATATCTGCCTGAGTTGCGTGCTCTAGATATTAGCAACAATAAGATCGTAGGCAATTTCCCAGATGGCATCATCAACTGCTCCTTCTTGGAAGTGCTCAACATGAGTTTCTTATATCTCGGTGGGAAGTTGCCAAATTTCTCCCGCATGAACTCCCTTCGTGTGCTGGACTTATCCTACAACAAATTCGCAGGAGATTTCCCCGTGTCCATTACCAACCTTACCAATCTTGAGGTTGTAAACTTCAATGAGAATGGCAACTTTAATCCCTGGGAACTTCCAGAGGACATCACGGAATTGAAGAAGCTCACGTCATTGATCCTGTCAACCTGCATGCTTCAGGGTCCTATCTTACCATCCCTAGGAAACATGACTTCCCTTGTTGATCTTGAATTAAGTGGAAACTACCTGAGTGGGAAAATTCCAGCAGAGCTAGGGAGACTAAAGAACCTCAAGTCCCTCATGCTTTACTATAATCAAAGGCTCACAGGGTCAATACCAGAAGAGTTGGGAAATCTCACAGAGCTTAGGGATCTGGACTTATCAGTTAATCAGTTGACCGGAAGGATACCAGATTCAATATGTAGTCTTCCCAAACTCAATTCCTTACAGCTTTACAACAACAGCCTCACAGGAGAAATTCCAGCTGTTCTGGGGGGCTCAAAAACTTTGAGCATCTTATCCATCTACGACAACTTTCTGACAGGTGAGGTTCCACAAAACCTTGGGAAGCTATCATCTATGATTCTATTAGACTTGTCAGAGAATCAACTGTCCGGAAGATTGCCACCATACATCTGCAACGGAGGTAAACTCATATACTTTCTTGTTCTTTCCAATAAGTTCACAGGAGAAATACCTGAGAATTATGTAAAGTGCACATCACTTCAACGGTTCCGAGTTAGCAACAACCAGTTAGAGGGTAATGTACCAGAAGGACTTTTTGGTCTCCCCCATGTGTCCATCATTGATTTGGCTTCCAATCAACTCACTGGTCCAATATCCCCAGAGATTAGAAATGCCAGAAATATGTCAGAATTCTTAGCTCAGAACAACAAAATGTCAGCAGCTATACCTCCTGAGATATCTGGAGCACTCAATTTGGTGAAAATTGACCTAAGCAACAATCTTCTATCTGGGCCTATACCTACAGAACTTGGTAACCTCAAAAAGCTCAACCTGTTGTTGTTACGAAGCAACAAGCTCACTTCTTCCATCCCAGAATCTCTCTCACAACTGATGTCCCTTAATTTTCTTGATCTATCTAACAACCAGTTGACAGGAAATGTCCCTGAGAACATATCTGAATTACTTCCTAACTCCCTTAACTTCTCAAATAATCACCTTTATGGTCCCATTCCTCTCTCACTAATTAAAGGGGGTCTTGAGGAAAGCTTCTTTGGCAATCCAGGTCTCTGTGTGACAGCATATTTAAATTCATCAGATACAAGTTTCCCACTTTGCTCTCAAACTTACAGCAAGAAGAAACTAAACCAAATGTGGGTGATAGTGGCCTCAGTGGTCATTCTATTGGTTGGAGGTATCTTGCTCCTAAAACGCTGGTCAAGCAAACAGAAATCATTAATAGGACATGATGAGACCATGTCATCATCTTTTTGCTCATATGACATAAAAAGTTTCCACAGAATAAGCTTTGATCAGCGTGAGATCCTAGAAGCCATGGTTGAGAAGAACATTCTTGGTCATGGGGGATCAGGAACTGTGTACAGAATTGGTTTAAGCAACGGGGATATTGTTGCAGTGAAGAAGTTGTGGAGCCAAAACACGAAAGACTCTCTGTCAGAAGACCAACTATTCCCAAGCAAAGAACTTCAGACAGAAGTTCAGACTCTTGGCAGTATAAGGCACAAGAACATCGTGAAGTTGTACTGTTATTTGTCAAGTTGGGATTGTAGCTTGCTGGTTTATGAGTACATGCCAAATGGAAACCTTTGGGATGCCCTTCACAAAGGAAAGATTCTATTGGATTGGCCAACCCGCCATCAGATTGCCTTGGGAGTTGCCCAGGGTTTGGCTTACCTTCATCATGATTTGCTGCCCCCAATTGTTCACAGAGACATCAAGTCATCCAACATACTCCTTGACGTTGACAACCAGCCAAAGGTTGCAGACTTTGGTGTGGCCAAGGTCCTGCAGGCCAAGACTGGAAAGGATTCTAGCCACACTGTTGTTGCAGGGACTTACGGCTACATGGATCCAGGTAAGACCAAACATTCTTATGTCTTCGGCTTTTGCAACCAAGTTAGTCACAAAATGAACATCTTACAATATATTTTTAAGCCATATAATCTGCATGTAATCCCCTTACATTTTTCTTTAATTTTTCCAGATCTACTAGCAAACCGCCCTGAACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63339.p1 GENE.S_Transcript_63339~~S_Transcript_63339.p1 ORF type:complete len:881 (+),score=112.01,Pkinase|PF00069.21|3e-35,LRR_8|PF13855.2|0.043,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0081,LRR_8|PF13855.2|1.7e-05,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|0.46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|1.8e-05,Pkinase_Tyr|PF07714.13|1.5e-24,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.0023,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0052,LRR_4|PF12799.3|18,LRR_4|PF12799.3|13,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|5.1,LRR_4|PF12799.3|78,LRR_1|PF00560.29|28,LRR_1|PF00560.29|22,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|7.9e+02,LRR_1|PF00560.29|3.6e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|41,LRR_1|PF00560.29|14,LRR_1|PF00560.29|1.5e+03 S_Transcript_63339:369-3011(+)
MALQFICLSSFLLFLSLLNPLQATNDKQSQYFSLMKRSLSGNTWSDWSAKGENSYCNYTGVACNIQGQVTKVNISGWSLEGSFPPDVCSYLPELRALDISNNKIVGNFPDGIINCSFLEVLNMSFLYLGGKLPNFSRMNSLRVLDLSYNKFAGDFPVSITNLTNLEVVNFNENGNFNPWELPEDITELKKLTSLILSTCMLQGPILPSLGNMTSLVDLELSGNYLSGKIPAELGRLKNLKSLMLYYNQRLTGSIPEELGNLTELRDLDLSVNQLTGRIPDSICSLPKLNSLQLYNNSLTGEIPAVLGGSKTLSILSIYDNFLTGEVPQNLGKLSSMILLDLSENQLSGRLPPYICNGGKLIYFLVLSNKFTGEIPENYVKCTSLQRFRVSNNQLEGNVPEGLFGLPHVSIIDLASNQLTGPISPEIRNARNMSEFLAQNNKMSAAIPPEISGALNLVKIDLSNNLLSGPIPTELGNLKKLNLLLLRSNKLTSSIPESLSQLMSLNFLDLSNNQLTGNVPENISELLPNSLNFSNNHLYGPIPLSLIKGGLEESFFGNPGLCVTAYLNSSDTSFPLCSQTYSKKKLNQMWVIVASVVILLVGGILLLKRWSSKQKSLIGHDETMSSSFCSYDIKSFHRISFDQREILEAMVEKNILGHGGSGTVYRIGLSNGDIVAVKKLWSQNTKDSLSEDQLFPSKELQTEVQTLGSIRHKNIVKLYCYLSSWDCSLLVYEYMPNGNLWDALHKGKILLDWPTRHQIALGVAQGLAYLHHDLLPPIVHRDIKSSNILLDVDNQPKVADFGVAKVLQAKTGKDSSHTVVAGTYGYMDPGKTKHSYVFGFCNQVSHKMNILQYIFKPYNLHVIPLHFSLIFPDLLANRPEH*

Click here to download the sequence:
Link to NCBI Protein BLAST