Transcript Information: S_Transcript_63393.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15537175744729
Replicate 30.12987842312395
Condition 2: 8 Hour
Replicate 10.15017880505023
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63393.p1 GENE.S_Transcript_63393~~S_Transcript_63393.p1 ORF type:5prime_partial len:142 (-),score=15.93 S_Transcript_63393:416-841(-)
AGAGGACAAGCAGTCCTCTGTAAAGTTATCAGATTACAAGTTAGCCCAATTATATTGGACTTGCAAGGTAGTGTAATCCTTAAAGGCCCCATGAGCCTTGGACTACAAAGAAGCACAGAAGGTGATCTTGCCCCAAAGAAGCTCAGTGGACAAGGAAGGGGAATTGGAGAAAACTCTCCCATTCCGTTCCAGCCAAATGCTCCAAAGAGTAGCCAAAATTGCATCGCGCCAAAGCATCTTCTTTTCCTGTCCCTTCCGACAACCCGTGAAGCTGTAGAAACTCCAGTACACCCTGTGGACAAGACCACATTCCCCACTGATAGCAAACAGCATGCTCCACAGACCCCTAACTACATCACATTCCAAGAACAAGTGAGCCGCCGTCTCCCCCGCTTTATGACACATGACACACATCGGGAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63393.p1 GENE.S_Transcript_63393~~S_Transcript_63393.p1 ORF type:5prime_partial len:142 (-),score=15.93 S_Transcript_63393:416-841(-)
RGQAVLCKVIRLQVSPIILDLQGSVILKGPMSLGLQRSTEGDLAPKKLSGQGRGIGENSPIPFQPNAPKSSQNCIAPKHLLFLSLPTTREAVETPVHPVDKTTFPTDSKQHAPQTPNYITFQEQVSRRLPRFMTHDTHRER*

Click here to download the sequence:
Link to NCBI Protein BLAST