Transcript Information: S_Transcript_63442.p2


Annotated TAIR IDAT5G11580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3718913-3721125 | Forward length=553
E-Value1.3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0505132066519
Replicate 21.8869491068927
Replicate 32.1840082204264
Condition 2: 8 Hour
Replicate 10
Replicate 20.29436642947009
Replicate 30.98165087654519
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 32.1571485346481


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63442.p2 GENE.S_Transcript_63442~~S_Transcript_63442.p2 ORF type:5prime_partial len:152 (+),score=19.43,RCC1_2|PF13540.2|1.1e-09,RCC1_2|PF13540.2|8e-10,RCC1|PF00415.14|0.13,RCC1|PF00415.14|8.8e-15,RCC1|PF00415.14|29 S_Transcript_63442:2-457(+)
GATCTGTTGCATTGCTCTCTGGTCTCTAGTGTATTTCTATTCCCTGGCCCTCAGGCACGAAAAAAAGAAAAAATAACAGTAACCCAAACAGAGCCACATAATCAATTCATGGCTGGCCGGAACCCTAGTATGAAGGTCGTAGCAGTCGCCGCCGGCGAGGCTCACACTCTCGCTCTCACCGGAGACGGAAAGGTTTACTCATGGGGCAGAGGTACTTTTGGCCGTTTGGGTAACGGGTCTGATTCTGATGAGAATTATCCGGTGCCCGTCAAATTTGATCATATTAATAATAATAATGGTGGTGGTACAGCTCTCAAGTTTGTTGGGGTTGCTTCTGGTGCTTATCACAGCCTTGCACTTGCTGATGATGGAACTGTCTGGTGCTGGGGCTACAACACCTGTATGTTCTCTTACAACTTTTTCTATGGTGTCAACTTGTTTGGGACTAAGGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63442.p2 GENE.S_Transcript_63442~~S_Transcript_63442.p2 ORF type:5prime_partial len:152 (+),score=19.43,RCC1_2|PF13540.2|1.1e-09,RCC1_2|PF13540.2|8e-10,RCC1|PF00415.14|0.13,RCC1|PF00415.14|8.8e-15,RCC1|PF00415.14|29 S_Transcript_63442:2-457(+)
DLLHCSLVSSVFLFPGPQARKKEKITVTQTEPHNQFMAGRNPSMKVVAVAAGEAHTLALTGDGKVYSWGRGTFGRLGNGSDSDENYPVPVKFDHINNNNGGGTALKFVGVASGAYHSLALADDGTVWCWGYNTCMFSYNFFYGVNLFGTKA*

Click here to download the sequence:
Link to NCBI Protein BLAST