Transcript Information: S_Transcript_63498.p1


Annotated TAIR IDAT5G01450.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:183693-186244 | Reverse length=444
E-Value2.2E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.657404387205
Replicate 214.567098233487
Replicate 313.004493392282
Condition 2: 8 Hour
Replicate 115.447237857923
Replicate 215.05797504597
Replicate 316.214619118319
Condition 3: 24 Hour
Replicate 118.90422609763
Replicate 217.239993421324
Replicate 314.712859236318


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63498.p1 GENE.S_Transcript_63498~~S_Transcript_63498.p1 ORF type:complete len:468 (+),score=80.39,DUF4793|PF16041.1|1.3e-30,DUF4792|PF16040.1|2e-24,zf-C3HC4_3|PF13920.2|2.3e-13 S_Transcript_63498:819-2222(+)
ATGGAGCAATCACCGCTGATTCTGTCCTCATCGTCGTCGTCCTCCATCAGCGACGAAGGTCCGTCCACGTCGGCGGAAGGTCCGTCGTCCAGGTTTGCGGGAGAGGAGAGAGAAAGTGGTGGTGGCGATTTGGATGAGGCACCGGTCATCACGCGCCAGTTGACCAGCACTTCGTATCGTGTCGGATACGCGCCTCGTGCAACGTCAGTTGGGCCTGATGAGTTGCACACTGATGATACTTTGTCTTGCGTGATTGTGGTCCTCACTTTCTGGTTCTTCGTGTCTATGACTCTCATTATGGGGATCTTTGGATCAGAGGATTTACAGCTTGGACCGTATAGCTCAATCCTGTTACAACCTAACCCATTATTTGTAGATTATTTAAAGATGGAAACATCAAAAGACATGAAAGCTGCTCCAGTTCTTTATGGTTTCTATAAAGCTCCTCCCCTAGATGTTGCTAAGACGTGGTCCGAGTCTCGAATTGCTTCAGTTAAACCTGAATCTCATGAGGAATGGGTTTATTACTTGAATGAGGGATCTCAAATTAAAATATCGTACAACGTGCCAAGTTCATCCCCTTTGTTGCTCATAATAGCAAAAGGGATTGAAGGAATGGCTGAATGGCTTGAGGATCCATCATATCCAGATAATGCTATGTCCTGGAATGTCATAAGGGGAAATGGCACTGTCATGCAGGATATCTCAAAGTCTTGCGATTATTATGTTGCTGTTGGCAACTTCAACTCTGAGAATGTAGAGGTGGAATTGAAGATGTCGATTAGATCTTCCATGTATGACATTACGGATTCATATTACAAGTGTGATTTGAGTCAAGGTTCATGCAGTTTGAAGGTAGCTTTTCCAGGGGGAAATGCTGCCGTGTTGACCACTGGAGCACCACAAGAGGGTGCTGAAAGTGAAAGATTGTATGTCAAGCTGTCCTTTGAACCGCGCTGGATGACATATTTTCTTGGTATAGGTGGGATGACTTCGATCATGTTATGGGCATTCAACTTCTTGAATAGGGTCAGACGTAACAATGAAGATGTAAATGAAGCTGGGGGTCTGAGATCAGAGAGAGCGCCATTGCTTTCTCAGAAAGATGATGATCTCTCTAGCTTGGGTTCATCTTATGATTCTGGTTCACAGAATGATGAGGATTCTCAAGATTGTCTAGAAGAAGGACTTATTGAAGGGAGCTCCACTGGAGAGGGTGGAAGAAAATACAGCTCCAGGCAACTTTGTGTGATATGCTTTGATGCACCTAAAGATTGCTTCTTCATTCCTTGTGGCCATTGCGCATCATGTTATACATGTGGAACAAGGATTGCTGAGATTGCTGGTACCTGCCCCATTTGTCGCCGTAAAATGAAGAAAGTTAGAAGAATATATAATGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63498.p1 GENE.S_Transcript_63498~~S_Transcript_63498.p1 ORF type:complete len:468 (+),score=80.39,DUF4793|PF16041.1|1.3e-30,DUF4792|PF16040.1|2e-24,zf-C3HC4_3|PF13920.2|2.3e-13 S_Transcript_63498:819-2222(+)
MEQSPLILSSSSSSSISDEGPSTSAEGPSSRFAGEERESGGGDLDEAPVITRQLTSTSYRVGYAPRATSVGPDELHTDDTLSCVIVVLTFWFFVSMTLIMGIFGSEDLQLGPYSSILLQPNPLFVDYLKMETSKDMKAAPVLYGFYKAPPLDVAKTWSESRIASVKPESHEEWVYYLNEGSQIKISYNVPSSSPLLLIIAKGIEGMAEWLEDPSYPDNAMSWNVIRGNGTVMQDISKSCDYYVAVGNFNSENVEVELKMSIRSSMYDITDSYYKCDLSQGSCSLKVAFPGGNAAVLTTGAPQEGAESERLYVKLSFEPRWMTYFLGIGGMTSIMLWAFNFLNRVRRNNEDVNEAGGLRSERAPLLSQKDDDLSSLGSSYDSGSQNDEDSQDCLEEGLIEGSSTGEGGRKYSSRQLCVICFDAPKDCFFIPCGHCASCYTCGTRIAEIAGTCPICRRKMKKVRRIYNV*

Click here to download the sequence:
Link to NCBI Protein BLAST