Transcript Information: S_Transcript_63546.p1


Annotated TAIR IDAT5G05250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1557116-1557835 | Reverse length=239
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.345156999456
Replicate 234.88305916526
Replicate 331.900948901363
Condition 2: 8 Hour
Replicate 118.299490339702
Replicate 218.592820153286
Replicate 39.9377938158359
Condition 3: 24 Hour
Replicate 155.202610982988
Replicate 247.777764944732
Replicate 345.501931460581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63546.p1 GENE.S_Transcript_63546~~S_Transcript_63546.p1 ORF type:3prime_partial len:148 (+),score=33.41 S_Transcript_63546:238-678(+)
ATGGCAATTGCAATGGCATATAATAAGGGCATTGCTCAATTCAATTATACAAGTAACAGTTTTGCCAAATTGAAGAACTCAGCAAGATTAGCACAAAATTGCAGAGAATTAAGGGGTTGTGATTACAAGATGAGGCTAAGAATGAATATTCATCAGGTTAAGGCTGCTGTGAATGGCGATATTATAAGAGATGGTGCTGATGATCATAATTGGAAGAAAATTGCTGCACAACAACTTGATCATTGGTTGCATAATTCTGTTGCTGAGATTGTAAAGAACATTGGTGAAGCACCTTTTCTAGTGCATATCTACACAGACAACAATGGGCTTGGATCTTCACCATCACCACCACCACCATCATATTCTGCCAGAAATATGAAATTTGTAATAGAGAAAACGACACAAGAAGCTTGGCCTATAATTAAACAAAGGTGGGAGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63546.p1 GENE.S_Transcript_63546~~S_Transcript_63546.p1 ORF type:3prime_partial len:148 (+),score=33.41 S_Transcript_63546:238-678(+)
MAIAMAYNKGIAQFNYTSNSFAKLKNSARLAQNCRELRGCDYKMRLRMNIHQVKAAVNGDIIRDGADDHNWKKIAAQQLDHWLHNSVAEIVKNIGEAPFLVHIYTDNNGLGSSPSPPPPSYSARNMKFVIEKTTQEAWPIIKQRWES

Click here to download the sequence:
Link to NCBI Protein BLAST