Transcript Information: S_Transcript_63550.p1


Annotated TAIR IDAT5G05250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1557116-1557835 | Reverse length=239
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.284968129577
Replicate 246.830595459246
Replicate 345.718200176588
Condition 2: 8 Hour
Replicate 124.430236416946
Replicate 226.486211607952
Replicate 315.272273954527
Condition 3: 24 Hour
Replicate 175.578275065159
Replicate 267.036254930805
Replicate 363.973154774662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63550.p1 GENE.S_Transcript_63550~~S_Transcript_63550.p1 ORF type:complete len:261 (+),score=48.92 S_Transcript_63550:238-1020(+)
ATGGCAATTGCAATGGCATATAATAAGGGCATTGCTCAATTCAATTATACAAGTAACAGTTTTGCCAAATTGAAGAACTCAGCAAGATTAGCACAAAATTGCAGAGAATTAAGGGGTTGTAATTACAAGATGAGGCTAAGGATGAATATTCATCAGGTTAAGGCTGCTGTGAATGGCGATATTATAAGAGATGGTGCTGATGATCATAATTGGAAGAAAATTGCTGCACAACAACTTGATCATTGGTTGCTTAATTCTGTTGCAAAGAGTGTAAAGAACATTGGTGAAGCACCTTTTCTAGTGCATATCTACACAGACAACAATGGGCTTGGATCTTCACCATCACCACCACCACCATCATATTCTGCCAGAAATATGAAATTTGTAATAGAGAAAACGACACAAGATGATTGGTCTTTAATTAAACAAAGGTGGGAGAGCAGTTACTCTGAAATTCCTCATGGTATTATCTTTGTGGGACAACTTGAGAGCAAATATAAGCAACAAGCACAACATGACAAAAGTACTAGTAATAGTGGCAAATATTGTACTAGCAATAATCAAATAATGTCATCAAGCACAAAATTGTGGGGTGTACTTGTTCAAGGAAGAGACCACCTTCATTTCCCAGCTTGTTATCTTCTCAAGACTTGTCAAGTACAGTGTTGCTTTGGATTCAGCACCCACTTTTGTTTAGCCAAGGTTGATAACTTTGGCATCTGTTGTGGTGATGGTGCTACTACTTTTGATTTTCATTTGAATAAAATGTGGTTGCAAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63550.p1 GENE.S_Transcript_63550~~S_Transcript_63550.p1 ORF type:complete len:261 (+),score=48.92 S_Transcript_63550:238-1020(+)
MAIAMAYNKGIAQFNYTSNSFAKLKNSARLAQNCRELRGCNYKMRLRMNIHQVKAAVNGDIIRDGADDHNWKKIAAQQLDHWLLNSVAKSVKNIGEAPFLVHIYTDNNGLGSSPSPPPPSYSARNMKFVIEKTTQDDWSLIKQRWESSYSEIPHGIIFVGQLESKYKQQAQHDKSTSNSGKYCTSNNQIMSSSTKLWGVLVQGRDHLHFPACYLLKTCQVQCCFGFSTHFCLAKVDNFGICCGDGATTFDFHLNKMWLQR*

Click here to download the sequence:
Link to NCBI Protein BLAST