Transcript Information: S_Transcript_6356.p1


Annotated TAIR IDAT5G10710.2
Annotated Gene NameINVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3379619-3382648 | Forward length=312
E-Value9.5E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.971806026768
Replicate 212.137887264165
Replicate 310.987161922145
Condition 2: 8 Hour
Replicate 114.324958237345
Replicate 217.271883144348
Replicate 316.45661182877
Condition 3: 24 Hour
Replicate 113.677951364931
Replicate 213.50184519442
Replicate 311.116098597999


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6356.p1 GENE.S_Transcript_6356~~S_Transcript_6356.p1 ORF type:complete len:329 (+),score=66.84,CENP-O|PF09496.6|2.6e+03,CENP-O|PF09496.6|1.1e-26 S_Transcript_6356:244-1230(+)
ATGGTTGATCATAAGCCATATTCAATGGCAGAATCTAACTATATTCACGATGAAGATATACGGATTGAGTCTATTAAAGCTAGATTTAAAAATGTTATGAAGAGACATACTGATTTGACGGAGCGGCTTTCCAGGGATTCTGACAAGATGATATTTGAACGTTTGCAAAAAGAATTTGAAGCTGCACGTGCATCTCAAACTCAAGAGATCTATCTTGAAGGTGAAGAATGGAATGATGGATTGTTAGCCACAATTAGAGAGAGGGTTCATATGGAGGCAGACAGGAAGGCAACAGGAGGGGATTCAAACATGTTGGTTGATTCTTCTTTTCTTGGAAAAATCACTTACAGGGTGGGAAGTAAGGTTATATGTTGTTTGGAAGGTGCAAGGATTGGCATACAGTATGAAACATCTTTTGCCGGAGAACCTTGTGAACTCTACCACTGTGTGCTTGAGAGCAAGTCCTTTTTGGAAAAGATGACCGTTCTTGAGCACACAATTCCTTTCTTTCTGCCTATACGAGAAGCTGAAAATGATCTTCTGTCTTCCAATGCAATGAAATTTATAGATCATGTTGGAGAACTGTTGCAGGCCTATGTAGACAGGAGAGAGCAGGTTCGCCTTATGAGAGAGTTGTATGGGAACCAGATTGGAGATCTGTACCATAGTCTACCTTTTCATATGATTGAATTTGTGCTGGAGGATTATGATTGCACCAGGATCACAGTCAGTCTCAAATATGCAGATTTGGTGTCTGTTCTTCCAACCAGAGTAAGAGTTATGGCTTGGCCATTGAACCCCTCCAAGAAGGGTCTCACAAGTGCTGCACAGATGACTAGGAAGGGGAGTTCAGCAGTACCAAGCCACCTTATCCCTGCTCGTCTATCTTATGCTGAAGAGGCCTTACGAACGTTGAGCTTACCTGAAGCTTTTGCAGAAATCGTATTGAACTTGCCACGAGCGCTCCAGCAGGTATTCCCTTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6356.p1 GENE.S_Transcript_6356~~S_Transcript_6356.p1 ORF type:complete len:329 (+),score=66.84,CENP-O|PF09496.6|2.6e+03,CENP-O|PF09496.6|1.1e-26 S_Transcript_6356:244-1230(+)
MVDHKPYSMAESNYIHDEDIRIESIKARFKNVMKRHTDLTERLSRDSDKMIFERLQKEFEAARASQTQEIYLEGEEWNDGLLATIRERVHMEADRKATGGDSNMLVDSSFLGKITYRVGSKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFLPIREAENDLLSSNAMKFIDHVGELLQAYVDRREQVRLMRELYGNQIGDLYHSLPFHMIEFVLEDYDCTRITVSLKYADLVSVLPTRVRVMAWPLNPSKKGLTSAAQMTRKGSSAVPSHLIPARLSYAEEALRTLSLPEAFAEIVLNLPRALQQVFPS*

Click here to download the sequence:
Link to NCBI Protein BLAST