Transcript Information: S_Transcript_63564.p1


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value1.5E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4441961497008
Replicate 29.4499710517327
Replicate 311.897499326658
Condition 2: 8 Hour
Replicate 16.5616585591178
Replicate 28.2916641811574
Replicate 39.5026942994235
Condition 3: 24 Hour
Replicate 15.1556980266262
Replicate 24.6754016888269
Replicate 35.1590545374101


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63564.p1 GENE.S_Transcript_63564~~S_Transcript_63564.p1 ORF type:complete len:572 (+),score=13.40,AMP-binding|PF00501.24|7.3e-84,AMP-binding_C|PF13193.2|5.3e-25 S_Transcript_63564:49-1716(+)
ATGGAACATCTAAAACCAAGAGAAGCAAACTCACCCCCACTTACCCCCATATCCTTCCTAGACCGAGCAGCCACGGTTTACGGTGATTGCAGGTCCATCGTATACAATAACACCGTCTACACGTGGTCTGATACCCACCGTCGATGTCTCCAAATAGCCTCTTCAATCTCATCCCTCGGTATAGGAAGGCGCCACGTGGTTTCTGTTTTAGCCCCTAACATTCCAGCCATTTACGAGCTTCACTTTGCTGTGCCTATGAGCGGTGCCATCCTTAATTCCATCAACACCAGGCTCGACACCAGGACTGTTTCCGTGATCCTCCACCACAGCCAATCAAAGCTCGTCTTCGTTGACTATCAGTCTTTGCAACTCCTTAAGGATGCTCTTTCTCTTTTCCCATCCAACTACCCTAAGCCAATCATTGTCCTTATCCAGGAGGAAAATGACCAAATTACCCCTGAAGGTGGAATTTTTGCGACTTACGAGGAGGTGGTCCGCAAAGGAGATCCGGGTTTCCAATGGATCCGCCCTTTGACGGATTGGGATCCCATCGTGTTGAATTATACTTCCGGAACGACGTCGTCTCCCAAGGGTGTGGTCCATTGCCACCGGGGTTCTTTCATCACGAGTGTGAACTCAATCTTGGACTGGACCCTTCCAGCCCAGCCCATTTATTTGTGGACCCTACCCATGTTCCACGCCAATGGTTGGGGTTACACATGGGGGATGGCCGCGGTGGGAGGAGTCAACGTCTGTCTTCGGAAGTTTGACGGAGCCACAATTTATAAGGAGATAGAGCGGCATAAGGTAACCCACATGTGCGGGGCTCCTATTGTGCTCAACATGCTCTCGAACCACCCCAACCCGACCCGTCTAACCCGGCCCGTGAACATCCTCACGGGCGGGGCACCCCCGCCAGCCGCGGTCTTGCACCGGACGGAGGCGCTTGGGTTCGTGGTGAGCCACGGGTACGGGTTGACGGAAACGGGCGGGATAGTGGTGTCGTGTGCTTGGAAGTCTCATTGGGACAAGTTCCCCGCCGATGAACGGGCTAAGCTCAAAGCCCGTCAAGGGATACGGACCATCGGCACAACTGAGGTGGACGTGATCAATCCCGACACCGGAAAATCCGTGAAGCGTGACGGACTTTCCGTTGGGGAAATCGTCCTCCGAGGGTGGTCCCTAATGTTGGGTTACCTTAAGGACCCTCAAGGGACCATTAAATGCATGGGAAAAGATGGTTGGTTTAGAACAGGAGATGTTGGGGTCATGCATCCGGACGGATACTTAGAAATCAAGGATCGGTCCAAGGATATCATAATAAGCGGGGGAGAAAACATTAGTAGTGTGGAGGTCGAATCCATATTGTACACTCATCCGGCAGTCAACGAGGCGGCGGTGGTGGCAAGGCCCGATGAGTATTGGGGAGAAACACCATGTGCATTTGTGAGCCTGAAGCAAGGATTAGAAGGAAAGAAACCAACTGAGAAAGACATAATAGAATATTGTAGACAGAAATTGCCGCGCTATATGGTGCCAAAAACGGTGGCTTTCAAAGATGAGTTGCCTAAAACTTCCACAGGGAAGATTCAAAAGTTTGTGCTTAGGGATATGGCCAAGAGATTAGGTCCAATATCAGCACCATCAGCAACCACAAGTCGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63564.p1 GENE.S_Transcript_63564~~S_Transcript_63564.p1 ORF type:complete len:572 (+),score=13.40,AMP-binding|PF00501.24|7.3e-84,AMP-binding_C|PF13193.2|5.3e-25 S_Transcript_63564:49-1716(+)
MEHLKPREANSPPLTPISFLDRAATVYGDCRSIVYNNTVYTWSDTHRRCLQIASSISSLGIGRRHVVSVLAPNIPAIYELHFAVPMSGAILNSINTRLDTRTVSVILHHSQSKLVFVDYQSLQLLKDALSLFPSNYPKPIIVLIQEENDQITPEGGIFATYEEVVRKGDPGFQWIRPLTDWDPIVLNYTSGTTSSPKGVVHCHRGSFITSVNSILDWTLPAQPIYLWTLPMFHANGWGYTWGMAAVGGVNVCLRKFDGATIYKEIERHKVTHMCGAPIVLNMLSNHPNPTRLTRPVNILTGGAPPPAAVLHRTEALGFVVSHGYGLTETGGIVVSCAWKSHWDKFPADERAKLKARQGIRTIGTTEVDVINPDTGKSVKRDGLSVGEIVLRGWSLMLGYLKDPQGTIKCMGKDGWFRTGDVGVMHPDGYLEIKDRSKDIIISGGENISSVEVESILYTHPAVNEAAVVARPDEYWGETPCAFVSLKQGLEGKKPTEKDIIEYCRQKLPRYMVPKTVAFKDELPKTSTGKIQKFVLRDMAKRLGPISAPSATTSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST