Transcript Information: S_Transcript_6369.p1


Annotated TAIR IDAT1G02150.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:408779-410433 | Forward length=524
E-Value5.1E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.638608480941
Replicate 221.361728954753
Replicate 326.302444171565
Condition 2: 8 Hour
Replicate 129.815685901337
Replicate 230.442440765834
Replicate 329.80234394117
Condition 3: 24 Hour
Replicate 116.250960054685
Replicate 219.317192670681
Replicate 317.254707013593


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6369.p1 GENE.S_Transcript_6369~~S_Transcript_6369.p1 ORF type:complete len:535 (+),score=94.81,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|0.43,PPR|PF01535.16|0.0026,PPR|PF01535.16|43,PPR|PF01535.16|1.1,PPR|PF01535.16|31,PPR|PF01535.16|0.013,PPR|PF01535.16|0.043,PPR|PF01535.16|0.18,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|6.3,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|17,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|10,PPR_3|PF13812.2|18,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.8,TPR_19|PF14559.2|3.8,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|45,TPR_19|PF14559.2|1e+03,TPR_2|PF07719.13|5.4e+02,TPR_2|PF07719.13|2.6e+02,TPR_2|PF07719.13|3e+02,TPR_2|PF07719.13|3.8e+02,TPR_2|PF07719.13|0.2 S_Transcript_6369:208-1812(+)
ATGATTCTACAATCAACCCTTAAACCACCAACCCCAAATTCATTATCCTCAGCACTCTCTTTTTCCCTGTCTTCGCCAGCTGGATCCCACTCTTTGGTTCATTTTCCAGCAATTAAAACCCACAATCCTTCAATAAAGTGCTCCTCAATACACCAAATATATAGCTATGGATCTGTTGACTATGAAAGAAGACCACCACTCAAATGGAACCATGTTTATAAGAGGATTTCTTTGATGGAGAACCCTGAAATGGGTGTGGCTTCTGTGTTGAACCAGTGTGAAAAAGAAGGCAAAAGGCTCAATAAATATGAGCTTTCTAGGATTGTTAGAGAGCTTAGAAAGTTTAGAAGATTCAAGCTTGCTCTTGAGGTCTATGAATGGATGAATAATAGGATAGAGAGATTCAGGCTGTCCAGCAGTGATACAGCCATCCAATTGGATCTAATTGCCAAAGTTCACGGGGTCTCTAGGGCTGAGGAATATTTCTTGAGGATACCTGATACAGTGAAAGACAATCGAATATATGGGGCACTCTTGAATGCATATGCGGGGTCCAGAGTAAGAGACAAAGCGGAGTTCTTGATGGAGCAAATGAGAAAAAAAGGTTATGCTAATCATCCACTTCCCTTTAATGTAATGATGACTCTGTACATGAAACTCAATCAATATGATAAGGTTGAGGAGCTGATTTCAGAAATGACATTGAAAAATGTTTTCCCGGATTTGTATTCTTACAATATTTGGCTATCTGCTCGTGGTTCTCGAGGTTCTGTTGAAGGGATGGAGCAAGTCTTTGAACAGGTAAAATTGGACCCAAGTATTAATCCTAATTGGACTACATTCAGCACAATGGCTGCATTCTACATTAAGTTCGGTCATCTTGACAAAGCTGAGCAGTACCTCAAAAGCCTTGAGACTAGAATCACCACACGGGATAGAATGCCATATCATTATCTTATAAGCCTATATGGTAGCTTGGGAAACAGAGAAGAGGTGTATCGTATCTGGAACATGTATAAATCAAGTTTCCCCAGTATCCCGAATTGGGGATATCATTCTGTGATCTCCGCACTTGTCAGGCTGGGTGACATTGAGGGTGCTGAGAAAATCTATGAGGAGTGGCTTCCTGTGAAGACGACCTATGACCCTAAGATCGGAAACCTTCTTATGGGTTGGTATGTCAGGGAAGGACCTTTTGAGAAAGCCAAGGAGTTCTTTGATCAATTGGTTGAAACTGGAGGGAAACCGACTTCAGGCTCATGGGAGATTCTCGGAGAAGGTTACATTAAAGAGGGCATGATTTCTGAAGCATTGTCTTGCTTCAAGGAAGCTGCTCTAGTTGATGATTCCAAGAAGTGGAAGCCAAAACCCTCTAATATCTCTGCCTTACTAGAGCTATGTGACGAAGAAGGTGATGTAGCTAGTAAGGAGGAGTTTGTTGGGTTGTTGAGACAACTAGGCTGCTCTCAAGATGAAGCTCACAGTTCACTTCAAGTTTGTGAAGGTGATGATGAGCTTATGCCTAATAACAGATCTAATACTGATAATGGAACCGAAGAAAATGAGGGCGACAATCCGGAATTGTTACTTTCATTTTCAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6369.p1 GENE.S_Transcript_6369~~S_Transcript_6369.p1 ORF type:complete len:535 (+),score=94.81,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|0.43,PPR|PF01535.16|0.0026,PPR|PF01535.16|43,PPR|PF01535.16|1.1,PPR|PF01535.16|31,PPR|PF01535.16|0.013,PPR|PF01535.16|0.043,PPR|PF01535.16|0.18,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|6.3,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|17,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|10,PPR_3|PF13812.2|18,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.8,TPR_19|PF14559.2|3.8,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|45,TPR_19|PF14559.2|1e+03,TPR_2|PF07719.13|5.4e+02,TPR_2|PF07719.13|2.6e+02,TPR_2|PF07719.13|3e+02,TPR_2|PF07719.13|3.8e+02,TPR_2|PF07719.13|0.2 S_Transcript_6369:208-1812(+)
MILQSTLKPPTPNSLSSALSFSLSSPAGSHSLVHFPAIKTHNPSIKCSSIHQIYSYGSVDYERRPPLKWNHVYKRISLMENPEMGVASVLNQCEKEGKRLNKYELSRIVRELRKFRRFKLALEVYEWMNNRIERFRLSSSDTAIQLDLIAKVHGVSRAEEYFLRIPDTVKDNRIYGALLNAYAGSRVRDKAEFLMEQMRKKGYANHPLPFNVMMTLYMKLNQYDKVEELISEMTLKNVFPDLYSYNIWLSARGSRGSVEGMEQVFEQVKLDPSINPNWTTFSTMAAFYIKFGHLDKAEQYLKSLETRITTRDRMPYHYLISLYGSLGNREEVYRIWNMYKSSFPSIPNWGYHSVISALVRLGDIEGAEKIYEEWLPVKTTYDPKIGNLLMGWYVREGPFEKAKEFFDQLVETGGKPTSGSWEILGEGYIKEGMISEALSCFKEAALVDDSKKWKPKPSNISALLELCDEEGDVASKEEFVGLLRQLGCSQDEAHSSLQVCEGDDELMPNNRSNTDNGTEENEGDNPELLLSFSE*

Click here to download the sequence:
Link to NCBI Protein BLAST