Transcript Information: S_Transcript_63750.p1


Annotated TAIR IDAT1G51580.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19125612-19128102 | Forward length=621
E-Value4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.504804775404
Replicate 212.453059032463
Replicate 312.726390478569
Condition 2: 8 Hour
Replicate 115.376545709907
Replicate 217.444932544518
Replicate 314.778524032817
Condition 3: 24 Hour
Replicate 114.717678436567
Replicate 212.348634692496
Replicate 313.865952633808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63750.p1 GENE.S_Transcript_63750~~S_Transcript_63750.p1 ORF type:3prime_partial len:613 (+),score=89.17,KH_1|PF00013.25|4.4e-06,KH_1|PF00013.25|6.7e-09,KH_1|PF00013.25|3e-09,KH_1|PF00013.25|0.87,KH_1|PF00013.25|2.1e-08,KH_3|PF13014.2|9.5e-07,KH_3|PF13014.2|4.5e-11,KH_3|PF13014.2|2.2e-09,KH_3|PF13014.2|1.7,KH_3|PF13014.2|0.00087,KH_2|PF07650.13|4.7,KH_2|PF07650.13|0.00055,KH_2|PF07650.13|0.65,KH_2|PF07650.13|7.5e+03,KH_2|PF07650.13|2.7,KH_4|PF13083.2|1.6e+02,KH_4|PF13083.2|2.9e+02,KH_4|PF13083.2|0.67,KH_4|PF13083.2|3.4 S_Transcript_63750:135-1970(+)
ATGCCTTGCCAAGACAGTACACAGACAACAGTCGTTAGCAGCGTTAGTATTTCATTGTCACCCCCGCTAGCGTCTCGCATCCAATTCTCTCTCCTCTCTCCTCTCTCCTCTCGCCTCTCTCCACTTTCACTCTCTGAGATGTCCGACAGCAAGAACCCCAAACCAAAACGGGGCCTAGTCAGGGCCCACCAACACAAGCCCATAACCCTCACCGTCTCTGATGGCCAAGTAGCCTTCCGTCTCCTCTGCAGCATCTACGCCGCCGGTGGTGTCATCGGTCACTCCGGCTCCGTCGTTAAGCGTCTTGAGAGAGAGACCTCTGCCAGGATCCACGTCGACCACCCCGTCTCCTCCACGTCCAAGGAGCGCGTCGTCAAGGAGCGCGTCGTCCACGTCATTGGCTCCGTTTCCGTTGACCGGAGGTTCCGATTCCACGACGATGGTGAAAACGTCGACGTTTCGGCCGCTCAGGAGGGTCTTCTTAGGGTTTTCGACAGGGTTCTGGAGGTGGAGCCCGTTTCCGAAGGTGGAGTTATACGGTGTCGTTTATTGGTGGGTGCTGGAATGGCTGGTGCTGTTATTGGGGAAGGAGGTAAGAGGATTAACAAGATTACTAAGGAGACAGGTGCTTTTATTAAGATCTTGACCCAGGATTCCCTCCCTCCTTGCGCTGATTCCTCCGATGAATTAATTCAGATTACTGGTGGAAGCCTACCTGTGAGGAAATCTCTGGTTGTTATTTCACAGTGTCTTCAACAGAAGGCATCACAAGTTGTAAGAGCTAATGGGGCAACTCCTACTGCAGTTTTACAGCCAAGTATGGACATGGAGACCAAGGAAGTTGGGGTCAGTGGTACATTGAATGCAGTAGTAACAACAGAAGTTGTTTTCAGATTACTTTGTCCATGTGATGCAGCTGGTGCTGTGATTGGCTGGAAAGGGAGGAAAATTAAGGCTCTAGAGGAGGAAACAGGGGCTTCTATATTCTTTTCTGCTCCAGAGGCTGGCTGCAATGAGCGTGTCATCACTGTTTCAGCTTTTGAGAACGGGGACTCAAATCATTCCTATGCCCAAAATGCTGTTCTCCGTGTTTTCAATGAATCAACATCATTAGGTACGAGGAGAGCTGTGGCAGCCAGACTGCTTGTCCAGTCAAATGAAGCTGGTTGGTTACACTTTGGTGGGTCATCGAAAATCTCAGCTATACAAAAAGCCACTGGGGCTGAATTTCAAACATTGGAACATTATTTTACCCCAACCGGTGCTTCTTCCAACGAAAGAATTATACAGATACATGGTGAGTGTTCCAGTGTGCTTATTGCTCTATTTCAAGTCACCTGGAGATTGAGAGAGATTATGTTTGGCGATACGGTAGGAAGAGACAATGCACCTCTTCTCCCACATGAACTGTTCAATATGTGTCCTTATGTCGAAGGAACTGCTACATTAACAGCCAGAATGAATAACTGCAGAGTTTCTGAAGAAGTTAACGGTCCTCTGCCACACAAGTTCTCACAGTTTCCTAACGGTCACTGCTCGCCAACCGATATGGACAATCCGAGAGATCTGGCAATTAACAATGGTTTTGAACTTGGAAGTGTAAACAAATCTATTGTCGTGACAAATACAAAGGTGGAGCTTGCGATTCGTGAAGATGTCTTTGGTGCTGTCTATGGTCATAATGGGAGCAATCTAGCTCGTTTACGACTGATTTCAGGTGCAACTGTTGAAGTGCAGGATCCTTCCCCTGGGAGTGAGGGGAAGGTCATAATATCTGGGACACCTGATCAAACCCTGGCTGCTCAGAGCCTTCTCCAGGCATTTATGATGGAGACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63750.p1 GENE.S_Transcript_63750~~S_Transcript_63750.p1 ORF type:3prime_partial len:613 (+),score=89.17,KH_1|PF00013.25|4.4e-06,KH_1|PF00013.25|6.7e-09,KH_1|PF00013.25|3e-09,KH_1|PF00013.25|0.87,KH_1|PF00013.25|2.1e-08,KH_3|PF13014.2|9.5e-07,KH_3|PF13014.2|4.5e-11,KH_3|PF13014.2|2.2e-09,KH_3|PF13014.2|1.7,KH_3|PF13014.2|0.00087,KH_2|PF07650.13|4.7,KH_2|PF07650.13|0.00055,KH_2|PF07650.13|0.65,KH_2|PF07650.13|7.5e+03,KH_2|PF07650.13|2.7,KH_4|PF13083.2|1.6e+02,KH_4|PF13083.2|2.9e+02,KH_4|PF13083.2|0.67,KH_4|PF13083.2|3.4 S_Transcript_63750:135-1970(+)
MPCQDSTQTTVVSSVSISLSPPLASRIQFSLLSPLSSRLSPLSLSEMSDSKNPKPKRGLVRAHQHKPITLTVSDGQVAFRLLCSIYAAGGVIGHSGSVVKRLERETSARIHVDHPVSSTSKERVVKERVVHVIGSVSVDRRFRFHDDGENVDVSAAQEGLLRVFDRVLEVEPVSEGGVIRCRLLVGAGMAGAVIGEGGKRINKITKETGAFIKILTQDSLPPCADSSDELIQITGGSLPVRKSLVVISQCLQQKASQVVRANGATPTAVLQPSMDMETKEVGVSGTLNAVVTTEVVFRLLCPCDAAGAVIGWKGRKIKALEEETGASIFFSAPEAGCNERVITVSAFENGDSNHSYAQNAVLRVFNESTSLGTRRAVAARLLVQSNEAGWLHFGGSSKISAIQKATGAEFQTLEHYFTPTGASSNERIIQIHGECSSVLIALFQVTWRLREIMFGDTVGRDNAPLLPHELFNMCPYVEGTATLTARMNNCRVSEEVNGPLPHKFSQFPNGHCSPTDMDNPRDLAINNGFELGSVNKSIVVTNTKVELAIREDVFGAVYGHNGSNLARLRLISGATVEVQDPSPGSEGKVIISGTPDQTLAAQSLLQAFMMET

Click here to download the sequence:
Link to NCBI Protein BLAST