Transcript Information: S_Transcript_63811.p1


Annotated TAIR IDAT3G27700.1
Annotated Gene Namezinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10257681-10261330 | Reverse length=908
E-Value7.5E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.05755975788
Replicate 214.91999080833
Replicate 316.969674096093
Condition 2: 8 Hour
Replicate 119.326844685708
Replicate 217.797413135118
Replicate 317.161640883244
Condition 3: 24 Hour
Replicate 115.237911274057
Replicate 213.950674218455
Replicate 315.337366725582


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63811.p1 GENE.S_Transcript_63811~~S_Transcript_63811.p1 ORF type:complete len:939 (+),score=245.57,RRM_6|PF14259.2|6.2e-08,RRM_6|PF14259.2|0.066,RRM_1|PF00076.18|1.3e-06,RRM_1|PF00076.18|0.26,RRM_5|PF13893.2|4.2e-06,RRM_5|PF13893.2|0.71,Nup35_RRM_2|PF14605.2|9.7e-06,Nup35_RRM_2|PF14605.2|0.35 S_Transcript_63811:183-2999(+)
ATGGAGATGGAGCTGAAGAATTCATCCCCGAAGTCCGGTGTTTCTCCTCCAAATTGTGCCAGTGATCCAGAAGAGAAAGAAATAAGTGATGATGATGATGATGATCGCAATCATAAGCATCGTAGACGGGAAACGAGGTCTCAGTCCTTGGAGAGAGATCCATTGGACCAAGCTTTGACACAGCCCTACCGAAAGCGCAACAGGCCGTTTGAAAATGGCGATCCTCAGTCACACTTCAACTTTGACAGGGACTTCTCAAAGTTTGAAAAGAGACGCCCCGGAGTGAATTTCTCCCGATTTGCTGGTGATCATGGTTCTGGCAGAGGAAGAGGTAGAGATTACCAACGGGATTTACGGTTTAGTTCTGTTGATGTCGCTTCACAAATGGCTCACCCAGGTCCTATTCCCTCTGCCATGTTCTCAGGAAGAGGACTGTCTAATGTTTCAAATGCTCCGAATGCATCTTGGAACGGTTTTGGACTAATCCCTGCCATTCCAAATGGGCCAATGGATGCAATCAATCCTCTTGGACTGCCAGGAATCCTCAGACCACAGCTCAATCCTTCATTGAACATGGGTATTCAGCGTCAACGTTGTAGAGACTTTGAGGAACGTGGATTTTGTTTGAGAGGTGATATGTGCCCAATGGAGCATGGAGTCAATCGTATAGTTGTTGAAGATGTACAGAGCTTATCACAGTTTAACCTCCCTGTATCACTCCCAAGTGCACATCTATTGGGAACATCACCTGGAAGTGGATTTGTGCCACCAGTTAGTGTTTCTCCAAGTACGTTGATCAATAGTAGAGGTCTACATAGTAAAACAGGGAAGTCTGCTGTGGATGATGGTGCATTGAATCTGGATGGGGCATTTTCTGGTGCTGTTAGTGCTACTGGAGCAGATGTTTATGACCCTGATCAACCCTTATGGAACAATGATGGCAATGAACTGCAACCTCCCAATTTTGTTGAATCGGAGTCATTGATGGATGCTGAGTTATCTGATCGTCTAGTCCGCAACAGTGGAGCAGCTATTGGTTCACAAAGTACTAGTTCATCCGTCTGGGGAAGACTTAATAATTCGAAGAATAAATTAGAACTGAAAGAGAAATTTGACACTAGGCCAAAGCCCACAGAATTTTCAGAGGGCAGATCAAAAGAGATTCGTGAAGCATCAGGTGGCACTCAATCAATGTCTCATCTTGGAAAGCACAACAATGTGTCGACATTCAGCTCAAAAGCTGTTGGTGCAAATTCCAAGCTGCAAAATGATATAGGGTCTAATGTTAAGAAGCCAACGCAAAAGGCTCAACGCACTTTATTTGTCAACTGCATCCCCTTGAAAGACAACAAGAAAGAGAACCTTCTCTCTCATTTTAGAAAATTTGGAGAAGTGATTGATATTTATATTCCAGCAAACACTGAACGAGCTTTTGTGCAATTCTCAAAAAGGGAAGAGGCAGAGAGAGCTCTTAAGGCGCCTGATGCTGTGATGGGTAGTCGATTCATCAAGCTGTGGTGGGCAAATAGAGACAGCATAGCTGATGAGGGTATGAGCAGTGGCAACAATTTGTCTGTAACTCCCCGTAACTTACCAGCTGCATCGAGCTCACCTCATCCAGCTGTTGTTAATAAAGGAAAAGATAACCTGCAAACAGCTTCCAAATTGGTTATGCCTAAAACATCTGACAACCTTGTGACTGCTGGCAGTGATTCTAAACCTGTGACACCAAATGGTCCCAAGGCACCACTACCTGTGCAGAAGAAGGAGAGCTTGGAGCTTTTGAAGGAGGAGCTTCGTAAAAAGCAGGAGGAGCTAGAACAGAAGCGGAATGAATTCCGCAGACAGTTGGATAAACTTGCGAAACAAACTTCGGGAGTGAAGAGTGATGTACCAGCTGGACAAGCTACAGAGAAACAAAAGTTGGAAACATTGTCTGAAGCCACAAATGTTGGAAAGTCTGTTGATGCTGCTGTTTCTGGGTCATCATCGCAGGCTGAAATAGTGGCGAACAAACTATCAAATGTAGAGAATTTAGCATCTCAGAGATGCATGACACGTTCAGCTGCTGACCCTCAGAGCTTGAAGCCGACAGTTCGTCCAATAGCAGCTGCTGGAACTCCATTTCACATGAATAGATATAAATTGGATAATCGGCCCAAAACGTTTAGAATCTGTGCACCTTTACCAGTGGATTTGGCAAATATTGCTGCCTTGAGGGATCACTTTTCATCATATGGTGAGATATCTAATCTCGAGATTGAAGAGCTGGGTGAGGAAGATAGCCCTGATACCTGCAGTAATCCTGAGACAATGAGAAATTGCTCTGCGCGTGTAAGTTTTGCAACTCGCCATTCAGCTGAAAAGGCATTTGTGAATGGTAAGTCTTGGCAGGGACGCAATTTGCAATTCATATGGATAACTCCCAGTATTCCCAGTAGTAGCCGAAGTAGTGGAGAGAGCTCTTCTGCTCTGAGAGGTGCTTTCAATGCTGAAGTTCAGTCTGTGGAGAAAACAAAACATGATAATCCTCAGCATGTGTCTGGTCTCTCAGAAAGTAATTCATCTTTTCATAAATCATTGAATGAACTTTCTGAGGATAGCTCCAGGTCTGGTGGCAGAGGGAATTCTCCAGTTGCTATTGAAGATTCAGTTTTTGAGGCTCATTCTCCAGATAAATCAGCAAGTTATATTCCTTTGGAACACGATGAAGATGAAAATAGGGAGTCTGAAGTACAAGAAGAAATTGTTGGTGACGATATCCAGTCAGATGAAGATATGGAAGCCAGTCGGACTCTACTGTCCGGGGAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63811.p1 GENE.S_Transcript_63811~~S_Transcript_63811.p1 ORF type:complete len:939 (+),score=245.57,RRM_6|PF14259.2|6.2e-08,RRM_6|PF14259.2|0.066,RRM_1|PF00076.18|1.3e-06,RRM_1|PF00076.18|0.26,RRM_5|PF13893.2|4.2e-06,RRM_5|PF13893.2|0.71,Nup35_RRM_2|PF14605.2|9.7e-06,Nup35_RRM_2|PF14605.2|0.35 S_Transcript_63811:183-2999(+)
MEMELKNSSPKSGVSPPNCASDPEEKEISDDDDDDRNHKHRRRETRSQSLERDPLDQALTQPYRKRNRPFENGDPQSHFNFDRDFSKFEKRRPGVNFSRFAGDHGSGRGRGRDYQRDLRFSSVDVASQMAHPGPIPSAMFSGRGLSNVSNAPNASWNGFGLIPAIPNGPMDAINPLGLPGILRPQLNPSLNMGIQRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTSPGSGFVPPVSVSPSTLINSRGLHSKTGKSAVDDGALNLDGAFSGAVSATGADVYDPDQPLWNNDGNELQPPNFVESESLMDAELSDRLVRNSGAAIGSQSTSSSVWGRLNNSKNKLELKEKFDTRPKPTEFSEGRSKEIREASGGTQSMSHLGKHNNVSTFSSKAVGANSKLQNDIGSNVKKPTQKAQRTLFVNCIPLKDNKKENLLSHFRKFGEVIDIYIPANTERAFVQFSKREEAERALKAPDAVMGSRFIKLWWANRDSIADEGMSSGNNLSVTPRNLPAASSSPHPAVVNKGKDNLQTASKLVMPKTSDNLVTAGSDSKPVTPNGPKAPLPVQKKESLELLKEELRKKQEELEQKRNEFRRQLDKLAKQTSGVKSDVPAGQATEKQKLETLSEATNVGKSVDAAVSGSSSQAEIVANKLSNVENLASQRCMTRSAADPQSLKPTVRPIAAAGTPFHMNRYKLDNRPKTFRICAPLPVDLANIAALRDHFSSYGEISNLEIEELGEEDSPDTCSNPETMRNCSARVSFATRHSAEKAFVNGKSWQGRNLQFIWITPSIPSSSRSSGESSSALRGAFNAEVQSVEKTKHDNPQHVSGLSESNSSFHKSLNELSEDSSRSGGRGNSPVAIEDSVFEAHSPDKSASYIPLEHDEDENRESEVQEEIVGDDIQSDEDMEASRTLLSGER*

Click here to download the sequence:
Link to NCBI Protein BLAST