Transcript Information: S_Transcript_63836.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94372344805605
Replicate 20.46942105441521
Replicate 30.52319818676881
Condition 2: 8 Hour
Replicate 10.60497561183356
Replicate 20.79332796594775
Replicate 30.90705734489282
Condition 3: 24 Hour
Replicate 10.15492825170634
Replicate 20.32147250462904
Replicate 30.35775949510803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63836.p1 GENE.S_Transcript_63836~~S_Transcript_63836.p1 ORF type:internal len:141 (+),score=23.55,RVT_1|PF00078.23|2.6e-22 S_Transcript_63836:1-420(+)
GAGGTGGTGGATGATGCTAGAAGGAAGGGTTTCAAGGGGGTGGTTTTCAAGTTAGACTTTGAGAAGGCCTATGATAGGGTGTCTTGGGGTTTCTTGGATAGGGTCATGGAGGAAAAGGGCTTTGGTGAGCGGCGGCGTAAGTGGACTCGGGGTTGCTTTAGAAATGCTAGCTTCTCAGTGCTGGTTAATGGATCCCCCAGGGGCTGGTTCCCTTCTTCCCGGGGTTTGAGGCAGGGAGATCCTTTGTCCCCTTTCCTCTTTACCTTGGTGGTCGACGTATTGAGCCGCATGATAGACAGGGGGGTGGAGGTGGGGGAACTAGAGTGTTTTAGGGTCGGGAGGGAAGGTGTCCCTGTTTCCCACCTTCAGTTTGGGGACGATACGATCCTTTTCCTCTCTGCAAGCCACGAGGTGATCCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63836.p1 GENE.S_Transcript_63836~~S_Transcript_63836.p1 ORF type:internal len:141 (+),score=23.55,RVT_1|PF00078.23|2.6e-22 S_Transcript_63836:1-420(+)
EVVDDARRKGFKGVVFKLDFEKAYDRVSWGFLDRVMEEKGFGERRRKWTRGCFRNASFSVLVNGSPRGWFPSSRGLRQGDPLSPFLFTLVVDVLSRMIDRGVEVGELECFRVGREGVPVSHLQFGDDTILFLSASHEVIR

Click here to download the sequence:
Link to NCBI Protein BLAST