Transcript Information: S_Transcript_63898.p1


Annotated TAIR IDAT2G29200.1
Annotated Gene Namepumilio 1
Annotated Gene Symbol(s)APUM1, PUM1
Annotation TypeOrtholog
Chromosome Positionchr2:12549483-12553185 | Reverse length=968
E-Value6.8E-307
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.720683372801
Replicate 241.388921354328
Replicate 343.323221974649
Condition 2: 8 Hour
Replicate 166.200004189739
Replicate 267.361120547497
Replicate 360.274010351737
Condition 3: 24 Hour
Replicate 140.644431961094
Replicate 234.281813778492
Replicate 332.835724110283


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63898.p1 GENE.S_Transcript_63898~~S_Transcript_63898.p1 ORF type:5prime_partial len:911 (+),score=215.35,NABP|PF07990.8|1.6e+04,NABP|PF07990.8|9.3e-125,PUF|PF00806.15|2.3e-06,PUF|PF00806.15|1.9e-08,PUF|PF00806.15|1.2e-06,PUF|PF00806.15|1.1e-06,PUF|PF00806.15|1.7e-08,PUF|PF00806.15|1.9e-06,PUF|PF00806.15|0.00013,PUF|PF00806.15|2.5e-06 S_Transcript_63898:1-2733(+)
AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAACAATAATAATAATAACGGTAATGGTGCTGGTGGTAATGGTAATAACAATAATGGGAGCGGGTTGTTATTTTCAAAACAACCGGGGTTCAACGGAGGAGGAGGACATGAGGAGAATGGCGAATGGAGTAGTGTTGGATTGCCTGGGTTGGGTTTAGGAAATAGGCAAAAGAGTATTGCTGAGATTATTCAGGATGATTTGAATCATTCAACATCTACATCAAGAATCCCTTCTCGTCCTGCTAGCCGAAACACGTTTGATGAGAGTATCGCCACTTCAGAAGCTCAGTTTGCTTCACTGTCAACTACGGATGCTTTACGCACCAGTGGCAATGGACAAGGCATTTCATCAAACCATAACACTGGTGTTTCAGGTTCTCTTACTTATGCTTCTGCTTTGGGTGCTTCCTTGTCAAGGAGCACCACTCCTGATCCTCAGCTCATAGCTAGAGCCCCCAGTCCTCGCATCCCAGCTGTTGGCGAAGGTCGGGTTAACTCTATGGATAAAAGAAGTATCAATAGCCCAACTCCACTCCATGGTTCAGCCAATGGCCCTAATCCTGCTGCTGATCTTGTAGCTGCTTTGTCTGGCATGAACCTTTCTGGAGATCCACAGATGGATGAGGAGAAGCAAATGAGGCAGCAATTTCAGCGTGGAATGGGTGATCATCAGAACCTCTTCAATTTACATGGTGATCTTAACCATGTCAAACAGAACTCACATTTGGATTCTGCTGAGTTTGGGCCTTTCCAACAGCAGCCTGTATCACATTCCACTAAAGGATCATACTCCAATATGGGGAAAGGCAGTCAGGTTGGTATGGATCAGAACTACTACTTGAGGGCTGATGGTTTAGTTGAGCATCACAAGCACGGTGGACCAAATTCGCCTTCTAATTTTCATAGTGTTGGAAGCCCGAGCTCAGCTATTCCCAATTATAGTCTGAGTGGGCACAGCATCAATCCAGCTCTGGCTTCCATGATGGCAGGCCAGCTTGGTAGTGGTGCTTTGCCTCCATTGTTTGAAAATGCTGCAGCTTCAGCAGTTGGTGTAGGTGGCATGGATTCTCGAACATTGGGAGGAAGTGTAGCGTCAAGGACAAACTTAATGGCTGCTGCAGCAGAGCTGCAAAATCTTAGTAGAGGAGGGAGTCACTCTGCTGGCAGTGGTCTTCAGGTATCCCAGATTGACCCCTTGTATCCTCACTACTTAACATCAACTGATTACACTGCTGCCCAGCTGGCAGCCCTGAATGACCCTTCCGTTGACGGTGGCAATTCTTATATGGATTTGCTAGCACTCCAGAAAGCTTATTTGGGAACATTGCTTTCACCACAGAAATCGGATGGCCGGCCTTACCTTGGGAAATCTGCAGGATTGAATCATGGTTATTACAACAATTCAGGATTTGGTATTAACACAGCATATGGTGGAAATCCTTTAGTAAGCTCGCTTCTTCCTAACTCTCCTGTTGGATCTGGTAGTCCTCTGAGACATGGTGAGAGGAATATGCGACTGCCTTCTGGAATGAGGAACTTAGCAGCAGGTGTCATGGGATCTTGGCGCTCAGAAGCTGGCGGCTACATGGAGCAAAGTTTTGGATCGTCGCTGCTTGATGAGTTTAAAAGCAACAAAACTAAATGTTTTGAACTCTCAGAAATTGCTGGCCATGTTGTTGAGTTCAGTGCTGATCAGTATGGGAGTCGTTTCATTCAGCAGAAACTTGAAACAGCTACAACAGAGGAGAAGAACATGGTTTTTCATGAAATCATCCCTCAGGCATTGTCACTGATGACAGATGTATTTGGTAACTATGTGATCCAAAAGTTTTTTGAACATGGAACAGCATCTCAAATTAGAGAACTAGCTGACAAACTTACTGGGCATGTGCTGACACTTAGCCTTCAGATGTACGGCTGTCGAGTTATCCAGAAGGCCATTGAAGTTGTTGATCTGGACCAGCAGAAGAAGATGGTTGTAGAGCTAGATGGTCATGTGATGCGCTGTGTTCGTGATCAAAATGGGAATCATGTTATTCAGAAATGCATTGAATGCATACCTGAAGATGCTATTCAATTCATCATATCAACCTTTTACGATCAAGTGGTCACATTGTCAACTCATCCATATGGGTGTCGTGTTATTCAGAGAGTTCTGGAGCACTGCCATGATCCTACAACCCAGCGCATAGTGATGGATGAGATTATGCATTCTGTATGCATGTTGGCACAGGATCAGTATGGAAATTATGTTGTCCAGCATGTTCTGGAGCATGGCAAGCCACATGAAAGGTCTGCCATCATTAGCAAATTGACTGGGAAGATAGTTCAAATGAGTCAGCAAAAATTTGCTTCTAATGTCATCGAGAAGTGTCTAGCATTTGGGGATGCGACAGAGCGTCGAACCATGGTGAATGAAATGCTAGGAGCTACTGACGACAATGAGCCGCTTCAGGTGATGATGAAAGATCAGTTTGCAAACTACGTTGTACAGAAAGTGCTGGAAACTTGCGATGACCAGCAACTTGAAGTGATCCTCTCACGAATAAAGAATCATCTGAATGCGCTGAAGAAGTATACATATGGAAAGCATATCGTTGCACGTGTAGAAAAACTTGTTGCAGCTGGAGAAAGGAGAATCAGTTTGCAATCTCCATACCCTGCTCCAATGGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63898.p1 GENE.S_Transcript_63898~~S_Transcript_63898.p1 ORF type:5prime_partial len:911 (+),score=215.35,NABP|PF07990.8|1.6e+04,NABP|PF07990.8|9.3e-125,PUF|PF00806.15|2.3e-06,PUF|PF00806.15|1.9e-08,PUF|PF00806.15|1.2e-06,PUF|PF00806.15|1.1e-06,PUF|PF00806.15|1.7e-08,PUF|PF00806.15|1.9e-06,PUF|PF00806.15|0.00013,PUF|PF00806.15|2.5e-06 S_Transcript_63898:1-2733(+)
NNNNNNNNNNNNNNNNNNNNNNNNNGNGAGGNGNNNNGSGLLFSKQPGFNGGGGHEENGEWSSVGLPGLGLGNRQKSIAEIIQDDLNHSTSTSRIPSRPASRNTFDESIATSEAQFASLSTTDALRTSGNGQGISSNHNTGVSGSLTYASALGASLSRSTTPDPQLIARAPSPRIPAVGEGRVNSMDKRSINSPTPLHGSANGPNPAADLVAALSGMNLSGDPQMDEEKQMRQQFQRGMGDHQNLFNLHGDLNHVKQNSHLDSAEFGPFQQQPVSHSTKGSYSNMGKGSQVGMDQNYYLRADGLVEHHKHGGPNSPSNFHSVGSPSSAIPNYSLSGHSINPALASMMAGQLGSGALPPLFENAAASAVGVGGMDSRTLGGSVASRTNLMAAAAELQNLSRGGSHSAGSGLQVSQIDPLYPHYLTSTDYTAAQLAALNDPSVDGGNSYMDLLALQKAYLGTLLSPQKSDGRPYLGKSAGLNHGYYNNSGFGINTAYGGNPLVSSLLPNSPVGSGSPLRHGERNMRLPSGMRNLAAGVMGSWRSEAGGYMEQSFGSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFHEIIPQALSLMTDVFGNYVIQKFFEHGTASQIRELADKLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQKKMVVELDGHVMRCVRDQNGNHVIQKCIECIPEDAIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPTTQRIVMDEIMHSVCMLAQDQYGNYVVQHVLEHGKPHERSAIISKLTGKIVQMSQQKFASNVIEKCLAFGDATERRTMVNEMLGATDDNEPLQVMMKDQFANYVVQKVLETCDDQQLEVILSRIKNHLNALKKYTYGKHIVARVEKLVAAGERRISLQSPYPAPMA*

Click here to download the sequence:
Link to NCBI Protein BLAST