Transcript Information: S_Transcript_63950.p1


Annotated TAIR IDAT2G24120.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)PDE319, SCA3
Annotation TypeOrtholog
Chromosome Positionchr2:10249358-10254530 | Reverse length=993
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.586092234943
Replicate 232.748407553521
Replicate 335.878487588319
Condition 2: 8 Hour
Replicate 142.1117161672
Replicate 247.593902465101
Replicate 344.205059087782
Condition 3: 24 Hour
Replicate 122.419167586403
Replicate 224.611661914052
Replicate 325.40056241405


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_63950.p1 GENE.S_Transcript_63950~~S_Transcript_63950.p1 ORF type:complete len:989 (+),score=208.48,RNA_pol|PF00940.15|7.2e-161,RPOL_N|PF14700.2|3.2e-80 S_Transcript_63950:239-3205(+)
ATGTCATCAACAGCTTCATTCACTGCAATTCCACAAGTTCAAATTCACAAAACCCATTTTTCACTACTTATCCCATCACCCAATAACAGTCATTTGAGAATTCTAAAGCTCAATGAACCCCAACTTTGTTTCCCTTCAAACCTCTCATTACCTTCTTTGAACCAAAAACTGTGTAAAAGGAACAGCTTTTACCCACCTTATCTACAATCCCAGATAATACTAGACTCCCCTGAAGAAGATTTGGCTGATGTGGGTAGTACTAATACTAGTAGTAATGATAAAAAGTTAGTAGTTAAGAAAAATGATGGTAATAATAATGGAAGTATTCAGTTAAATGGGAGGATTTTTATGCAGGACCCACCTTGGGTAAATGCTCTTTTTATGAGAGGTTTATGTGAGACTAGTAGTAGTAGTAATGGGTTGAAGTTGGAATTCAAGGAAATTGAGAGACAAAAGTATAATATGTTGAGGAAAAGACAGATAAAGGCTGAGACTGAGGCTTGGGAGAAAATGGTGGAAGAGTATAGGGAATTTGTGAAGGAAATGAGGGATAAGAAATTGGCACCTAATTTGCCACAAGTGAAGGCTTTGTTTTTGGGTTGGTTTGAGCCTTTGAAGAAGGCAATTGAGAAGGAACAAAAGTTGCAAAGGTCTAGGAAACAAAAGGCTGTTTATGGGTTTCATATAGATATGTTGCCTGCTGATAAGATGGCTGTTATTGTTATGCATAAGATGTTGGCTTTGATGATGGTGGGTAATGAGGCTGGCTGTGTTAGACTTGTTCAAGCTGCTCTTCAGATTGGGATTGCCATTGAACAGGAGATAAAAATTCACGGTTTCTTGGAGAAAACCAAGAATATACGGAAAAATGCAAATGACATGCCAGAGGATTTATTAAAGGAAAAGGAGATTCAGCGGAATCGTGTAAAGACCTTAGTAAAGAGGAAAAGACTATTTGAAGCAGCAAGGATGGTGACAACTGAAGATGGCAAGTCTTGGAGTCAAGACACCCAAGCCAAGTTGGGCAGTCGTCTGATAGAATTGCTTATAGAAACAGCTTATGTACAGCATCCAGCCAGTCAATCTGCAGACAGTCCACCTGATGTTCGACCTGCATTTAGGCACAAGTTCAAAATTTTGAACAATGAACTAGGACAGCAAGTGGTGAAGAGATACGGAGTTATAGAATGTGATCCAATAGTCTTGCAAGGGATTGATAGGAGTGCACGGTATATGGTGATCCCTTATGTCCCAATGTTAATACCTCCGAAGAACTGGAGAGGGTATGACAAGGGTGGGTACTTATTCCTACCTTCTTATGTTATGCGAACTCATGGATCACGGAAGCAGCAGGATGCAATGAGGAAAACTCCACCACAGCAAATGCAGAAAGTTTTTGAGGCCTTGAATACGCTTGGAAACACAAAATGGAGGATCAACAGAAAAGTTCTTGACGTGGTGGAAAGCCTTTGGGCTAGCGGTGGCAACATTGCTGGCCTTGTTAATTGTGAAGATGTTCCTATACCAGAGAAGCCAGAGTCAGAGGATCCAGCAGAAATTGATGCATGGAAATGGAGTGTCAGGAAAGCAAAGAAAATCAATAGAGAGAGACATGCTTTACGATGTGATGTTGAACTCAAACTTTCCGTTGCTCGAAAGATGAAAGATGAAGAAGGCTTCTATTATCCTCATAATCTCGATTTTCGTGGTCGAGCTTATCCCATGCACCCCCATTTAAATCATCTGAGTTCTGATCTTTGTCGAGGTGTACTTGAATTCTCTGAAGGACGGCCTTTAGGGAAATCTGGATTGCATTGGCTGAAGATACATTTAGCAAACGTATATGCTGGTGGTGTTGACAAGCTCTCATATAAGGAGCGTGTAGCATTTGTAGAAAATCATCTTGATGACATATTTGAATCAGCTAGCAACCCTATCTATGGTAAGCGTTGGTGGCTGACTGCAGAAGATCCTTTTCAATGTTTAGCTGCTTGTATTGATCTATCAGAAGCCCTGAACAGTTCATCACCACATAATCTCATCTCCCACCTTCCAATACATCAGGATGGTTCATGCAATGGCTTACAGCATTATGCTGCTTTGGGAAGAGACAGTAAAGAAGCGGCAGCAGTCAACTTAGTTGCAGGAGAGAAACCAGCTGATGTGTATTCCGAAATTGCTGCAAGGGTTCGTGACATTATGGAAAAGGATAGCAGGAAAAACCCTGAAACTGAACCAAATGCTTCATTAGCCAAGGTTTTAGTTGATCAGGTGGACCGCAAACTGGTGAAGCAGACAGTAATGACTTCGGTATATGGTGTTACTTTTGTTGGGGCAAGGGAGCAAATTAAGAGGAGGCTAGAGGAGAAGGGTCTTATAACTGACGATAGGCTGTTATTCTCTGCAGCCTGTTATTCTGCTAAGGTAACAATGTCTGCCCTTGGTCAGTTATTTCAAGCTGCACGTGGTATAATGGATTGGCTTGGTGATTGTGCTAAGGTTATTGCGTCTGAGAATCAACCTGTTCGTTGGACCACTCCTCTGGGTCTCCCAGTTGTACAGCCGTACTGTAAAAGTAAACGACATCTTATAAAAACATCTCTTCAGGTTTTGGCCTTGCAGCAGGAGGGTGATGCGATTGAAGTTAAAAAACAACGGACTGCATTCCCTCCAAACTATGTTCACTCACTTGATGGAACTCACATGATGATGACTGCCGTGGCATGCCGGGATGCTGGTTTACAGTTTGCAGGGGTGCATGACTCATTTTGGACACATGCTTGCGATGTAGATCAGATGAACCGAATTCTTCGAGAAAAATTTGTGGAGCTATATGACATGCCCATACTAGAAAACTTGCTTGAAGGTTTCCAAGAATCATATCCGGGACTGGTTTTCCCACCTTTGCCCGATAGAGGGGATTTCGACTTAGAAGAAGTACTTGAATCACCATACTTCTTTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_63950.p1 GENE.S_Transcript_63950~~S_Transcript_63950.p1 ORF type:complete len:989 (+),score=208.48,RNA_pol|PF00940.15|7.2e-161,RPOL_N|PF14700.2|3.2e-80 S_Transcript_63950:239-3205(+)
MSSTASFTAIPQVQIHKTHFSLLIPSPNNSHLRILKLNEPQLCFPSNLSLPSLNQKLCKRNSFYPPYLQSQIILDSPEEDLADVGSTNTSSNDKKLVVKKNDGNNNGSIQLNGRIFMQDPPWVNALFMRGLCETSSSSNGLKLEFKEIERQKYNMLRKRQIKAETEAWEKMVEEYREFVKEMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQKAVYGFHIDMLPADKMAVIVMHKMLALMMVGNEAGCVRLVQAALQIGIAIEQEIKIHGFLEKTKNIRKNANDMPEDLLKEKEIQRNRVKTLVKRKRLFEAARMVTTEDGKSWSQDTQAKLGSRLIELLIETAYVQHPASQSADSPPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPIVLQGIDRSARYMVIPYVPMLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGNTKWRINRKVLDVVESLWASGGNIAGLVNCEDVPIPEKPESEDPAEIDAWKWSVRKAKKINRERHALRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFSEGRPLGKSGLHWLKIHLANVYAGGVDKLSYKERVAFVENHLDDIFESASNPIYGKRWWLTAEDPFQCLAACIDLSEALNSSSPHNLISHLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGEKPADVYSEIAARVRDIMEKDSRKNPETEPNASLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGLITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGDAIEVKKQRTAFPPNYVHSLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYDMPILENLLEGFQESYPGLVFPPLPDRGDFDLEEVLESPYFFN*

Click here to download the sequence:
Link to NCBI Protein BLAST