Transcript Information: S_Transcript_64224.p1


Annotated TAIR IDAT1G76160.1
Annotated Gene NameSKU5 similar 5
Annotated Gene Symbol(s)sks5
Annotation TypeOrtholog
Chromosome Positionchr1:28578211-28581020 | Reverse length=541
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.032134281613
Replicate 222.836208379642
Replicate 315.618479450872
Condition 2: 8 Hour
Replicate 110.859423851529
Replicate 210.525500743783
Replicate 318.248253300205
Condition 3: 24 Hour
Replicate 15.4813729791897
Replicate 212.54454515296
Replicate 313.727865497249


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_64224.p1 GENE.S_Transcript_64224~~S_Transcript_64224.p1 ORF type:complete len:542 (+),score=70.24,Cu-oxidase|PF00394.18|5.9e+03,Cu-oxidase|PF00394.18|3.1e-43,Cu-oxidase|PF00394.18|51,Cu-oxidase_3|PF07732.11|3.4e-34,Cu-oxidase_3|PF07732.11|1.5,Cu-oxidase_2|PF07731.10|34,Cu-oxidase_2|PF07731.10|3e+02,Cu-oxidase_2|PF07731.10|7.1e-29 S_Transcript_64224:211-1836(+)
ATGAGATCAAGAGGGTCGGCATTATTACAAGCCTTGGTTTGCTTTGTTTCTTTGTTCAACATTGTGTTTTCTGAGAACCCTTACAGATTCTTTGAATGGAATGTCACTTATGGTACAATTTACCCTCTTGGTGTTCCTCAGCAGGGTATATTGATAAATGGGCAGTTCCCAGGACCAGACATTCACTCTGTGACTAATGACAATCTTATCATCAACGTTTACAACAGTCTTGATGTTCCCTTCTTGCTCTCCTGGAATGGAATTCAGAACAGGAGGAACTCATTCGAAGATGGTGTATGGGGTACAACATGCCCAATTCCACCAGGGAAGAACTTCACTTACATTCTTCAAGTCAAAGATCAAATTGGTAGTTTCTACTACTTCCCGTCTCTTGCATTCCACAAGGCTGCTGGTGGTTTTGGAGGGATCAGGATCCTTAGCAGGCCCGGAATCCCGGTGCCTTTCTCACCCCCAGCTGAGGACTACACTGTTCTGATTGGAGATTGGTACAAGACTAACCACACGGTTTTGCAAAGCATCCTTGACAAAGGACACAGGCTTCCTGACCCGGATGGGATCCTAATCAATGGTCGTGGTAGTGGCGCCACTTTAAACATGGAGCAAGGCAAGACTTACAGGCTCAGGATCTCGAATGTTGGTCTACAAAATTCTCTTAATTTCCGAATCCAAGGTCACAAAATGAAGGTTGTAGAAGTTGAGGGAACCCACACCCTCCAAACTACATTCTCCTCACTCGATGTCCACGTGGGGCAGTCCTACTCAGTATTGGTTACAGCTGATCAGCCTGCTCAGGACTATTACATTGTTGTTTCATCTCGTTTCACCTCTCCTGTTATCACCACCACTGGTGTTCTTCGTTATGCCAACTCAGCTGGCCAAGTATCTGGTCCGATCCCTGGTGGGCCCACTATCCAAATCGACTGGTCCCTCAACCAGGCCCGTGCTATAAGGATCAATCTTACTGCTAGTGGACCAAGGCCAAACCCCCAAGGATCTTACCATTATGGATTGATCAACACTACCAAGACTATTATTCTACAAAATTCTGCAGGCCAAGTTAACGGCAAGCAGAGATATGCTGTTAACAGCGTGTCATTCATCCCCGCTGACACTCCCCTTAAGCTTGCAGACTACTTCAAGATTGGAGGCGTCTTCAGCGTGGGAAGCATCCCCTACCAGCCTAGCGGTGCAGGGATCTACCTCGCCACTTCTGTGATGGGTGTCAACTACAGAGAATTTGTCGAGATTGTGTTTCAGAACACCGAAAACATTGTTCAAAGCTATCATTTGGATGGTTACAACTTCTTTGTTGTTGGAATGGATGGAGGAACATGGACACCGGCTAGCAGAAAGAACTACAATCTCCGTGATGCAGTTTTCCGTTGCACCACACAGGTGTATCCAAATTCATGGACTGCAATCTACGTGGCGCTGGACAATGTGGGTATGTGGAACCTGAGGTCCGAGTTCTGGGCAAGGCAATACCTTGGACAACAATTGTATCTCCGAGTCTATACAACTTCGACATCCCTAAGGGATGAATTCCTTATTCCAAGGAATGCCCTTACTTGTGGCAGAGCTGCCGGCAGGCGTACAAGGCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_64224.p1 GENE.S_Transcript_64224~~S_Transcript_64224.p1 ORF type:complete len:542 (+),score=70.24,Cu-oxidase|PF00394.18|5.9e+03,Cu-oxidase|PF00394.18|3.1e-43,Cu-oxidase|PF00394.18|51,Cu-oxidase_3|PF07732.11|3.4e-34,Cu-oxidase_3|PF07732.11|1.5,Cu-oxidase_2|PF07731.10|34,Cu-oxidase_2|PF07731.10|3e+02,Cu-oxidase_2|PF07731.10|7.1e-29 S_Transcript_64224:211-1836(+)
MRSRGSALLQALVCFVSLFNIVFSENPYRFFEWNVTYGTIYPLGVPQQGILINGQFPGPDIHSVTNDNLIINVYNSLDVPFLLSWNGIQNRRNSFEDGVWGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPGIPVPFSPPAEDYTVLIGDWYKTNHTVLQSILDKGHRLPDPDGILINGRGSGATLNMEQGKTYRLRISNVGLQNSLNFRIQGHKMKVVEVEGTHTLQTTFSSLDVHVGQSYSVLVTADQPAQDYYIVVSSRFTSPVITTTGVLRYANSAGQVSGPIPGGPTIQIDWSLNQARAIRINLTASGPRPNPQGSYHYGLINTTKTIILQNSAGQVNGKQRYAVNSVSFIPADTPLKLADYFKIGGVFSVGSIPYQPSGAGIYLATSVMGVNYREFVEIVFQNTENIVQSYHLDGYNFFVVGMDGGTWTPASRKNYNLRDAVFRCTTQVYPNSWTAIYVALDNVGMWNLRSEFWARQYLGQQLYLRVYTTSTSLRDEFLIPRNALTCGRAAGRRTRP*

Click here to download the sequence:
Link to NCBI Protein BLAST