Transcript Information: S_Transcript_64282.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4447057813384
Replicate 21.1976942902651
Replicate 31.8442736083601
Condition 2: 8 Hour
Replicate 12.4981171514356
Replicate 22.3650239990568
Replicate 31.9488774953126
Condition 3: 24 Hour
Replicate 11.7475906792475
Replicate 21.5540899366638
Replicate 31.2971337122631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_64282.p2 GENE.S_Transcript_64282~~S_Transcript_64282.p2 ORF type:5prime_partial len:350 (-),score=67.55,gag_pre-integrs|PF13976.2|8.3e-16 S_Transcript_64282:2592-3641(-)
AAACTGAAACTTAATGATGTTATTGACTTGGTATTGAGTGAATGTCTTCGCCGAAAAGAGTCAGGGGTTGAGTATTCAGGAGGGGCATATAGTGCTGATAACCGGGGTAGGGGAAAACAAAGGAACAAGGAGGGTCATCATGGGAGAGGGAAGTCAAAGGGCAGGAGTAAATCAAGAGGCAGGGCTGAGATGATCTGTTGGAACTGTAATGGGAAGGGGCATCCCAAAAAGGAGTGTCCAAAACTCAAGAAGAAGGGAGTCGGGCCTAGTAGCAGTGGCCAACATGATAGTGATAGTGACGCTTCGGTAAATTATGCTATAGAAGAGTCACAGGTACAAGATGCCTTGATCTTGAGTGTTGACAGTCCGGTAGAATCCTGGATATTGGATTCGGGGGCATCATTCCACTCTTCACCATGTAAGGAATTGTTTAAGAACTTTCGGATTGGGAAGTTCGGTAAAGTTTACCTGGCCGACGGTAAACCCTTAGAAATTACTGGGAAAGGGGATGTAAGGATCAAAACTTCAAGTGGGAGCATCTGGGAACTGCAGGATGTTAGGTTCATTCCGGGCCTAAACAAAAATCTGATTTCGGTAGGGCAGTTAGATGCCAGTGGGTACAGAACTGTGTTCAGTGAGGGTGCTTGGAAGGTTTCACGGGGTGCTATGGTAATTGCACGGGGTTTCAAGACAGGCACATTATACACTACTGCAGGGTGTGAGAACATGGTTGCTGCAACCACAGGGGATGAGGTCAAGCTTTGGCACAATAGGCTTGGCCACATGAGTGAGAAAGGGATGAAGATTATGGCTTCAAGAGGTAAACTTTCCAATTTGAAATCAGTTGATCTTGAGGTTTGTGAGAGTTGTGTGATGGGAAAGCAAAAGAGAGTGACTTTCACAAAGAACAAGAGAGAGTTGAGAAAGGAGAAGCTGGAGTTAGTGCACACTGATGTGTGGGGTCCATACCACACGAAATCCCTTGGAGGTTCACAGTATTTTGTCACCTTTATTGATGACTCAGCAGGAAGGTGTGGGTCTACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_64282.p2 GENE.S_Transcript_64282~~S_Transcript_64282.p2 ORF type:5prime_partial len:350 (-),score=67.55,gag_pre-integrs|PF13976.2|8.3e-16 S_Transcript_64282:2592-3641(-)
KLKLNDVIDLVLSECLRRKESGVEYSGGAYSADNRGRGKQRNKEGHHGRGKSKGRSKSRGRAEMICWNCNGKGHPKKECPKLKKKGVGPSSSGQHDSDSDASVNYAIEESQVQDALILSVDSPVESWILDSGASFHSSPCKELFKNFRIGKFGKVYLADGKPLEITGKGDVRIKTSSGSIWELQDVRFIPGLNKNLISVGQLDASGYRTVFSEGAWKVSRGAMVIARGFKTGTLYTTAGCENMVAATTGDEVKLWHNRLGHMSEKGMKIMASRGKLSNLKSVDLEVCESCVMGKQKRVTFTKNKRELRKEKLELVHTDVWGPYHTKSLGGSQYFVTFIDDSAGRCGSTS*

Click here to download the sequence:
Link to NCBI Protein BLAST