Transcript Information: S_Transcript_643.p1


Annotated TAIR IDAT3G48200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17832949-17837371 | Reverse length=1088
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 189.025094295827
Replicate 2112.90602415635
Replicate 3107.91856041633
Condition 2: 8 Hour
Replicate 159.237195325369
Replicate 262.959027592673
Replicate 358.803007646164
Condition 3: 24 Hour
Replicate 1143.74251659339
Replicate 2137.03556015972
Replicate 3116.53135816681


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_643.p1 GENE.S_Transcript_643~~S_Transcript_643.p1 ORF type:complete len:1098 (+),score=163.59 S_Transcript_643:721-4014(+)
ATGGGTTTGAGAAGAATTCAATGGGGAGGTTTACTGCTTTGTTGGGGCTTCTGCATTTTATGTTTCAAAGCTCTTGGTGATGTTCCTCAAGTGTCTGTCAAGTTCCCGCAAGCTCCTTCTCTTTTCTCACATCTCAATTCAGCCACATTTGTCTTTGAAGCTCTAGTACCAAATTCAAGAGAGAACTGCTCCAACTGTAGCTTCAATTGCAAGTTAGATGATGCCATCTCTCCAGATTGCAGGCAAAGGAATGTTTCTTTTGTCGGTTTGCAAGATGGAAATCATAGCTTCAAGGTCTGCACCAATGCACCCCAAGGAGTTGGTTGTGCTAGCTATAATTGGGCTGTTGATACTGTTCACCCTACAGCGTACATTTCAGCTTCAACATCTTTCACAAATGCTGCCAATGTTACTGTAAATATTTCCTTCAGCGAACCCTGTACAGGTGGAGGTGGCTTTACATGCTCATCGGTTGATGCGTGCAACCTTCTTGTATATGGTGCTGGGCAAGTTATACCAAATACACTTAAAACTATCCAGCCATACCTCCAATACTCAGTTGTTGTCGCTTTATCTACTAAAGCAAAATATGGACGGGTAATCCTTGCAATGGACAAAGGGTTTTGCACAGACGAGGCTGGAAATAGGTTCATAAGACCAGCAAATGCAACTTTTGTACATTTTGATCGAAGAAGTGTGTTCGTTAGCCTGAGAACCCATGTTCCTGAAAGGCTACTTCAGCTTGGTGGCGAAACTAGAACTGTACAGGCAACAAATAGTAACAAGAATCTCAAGGTGTATCTTTACTTCACAGAGCCAGTTTTGAACACTTCGACAGAAATTATGAAATCTATCGACATAAGTCAGGGCTCACTACGCCCAATCAATGGCAGTAGCCTTGCCAATAGAAGATTTGGATTTCTGATTGAAGACATACCAAGCGTTACTGCCATCACAGTGAGCCTCAACTCAAGTTTTGTCATTAGCAGACAGGGGGCTCCTGTTTCTCCAGTTGCTCCAGCTACCTTTCTTTATGATTCAAAGAGGCCGGTAGTGAGGCTAAGCACAACCTCTAAAATGAGAACTAGAGACAGGAGCATTGCAGTGTCGATAAAATTCATGAAGCCTGTTTTTGATTTCAATGCTACTCACATGCTCATCTCTGGAGGCCATATAGAGAGTTTCAAACAAATAAGCAGGATTTCATACGTGGCTTTGATTCAGGCCTATGACGGCATCCTTTCTATCAGGGTTCCTGAAAATGTGACTGCAGATGTTGCAGGCAATCCAAATTTGGCTTCTAATGTCATAGAAGTGAGGCATTCAGATTCGTTGCCTATGATGTCTACAGTGTTTTCCATCTTTGTAACGACATTGTTTGTGGCGACATGTGTGGTGGCGGGCTTTCTCACAATATCCACTGCAAGCCTACAGGCTGCAGGGGCATTTCCAAGATCATCAAGTTCTCTGACATCTAATCCTACAAGAAATCTTTTTAGAATTGCATGCTACATTCAGGTGTTTGCTCTTTCTAGGTGGTTGGCTGTGACTTTGCCAGTTGAGTATTATGAATTCACAAGAGGCATAGAGTGGAGTGTTCCTTACTTGAGTCTTCCCTGGGAAGGCGACCACTCTCAGCCTATGGTTTTCAGCTCAAATACGTCGAGTAGCTCCTCTTTCTTAAGCACCAAAATCAAGAATTCTTCTGAGGTCCAAACAGTACAATTGAACAAAGGCAGTTTCGACAAGGCTGGAGTAGTATATGGTGCACCACTAACTGCTATGGAATACCAAACATATTTTGAGAGTCAAAATTATATCCCAGAAGCAGAATATATTGCAGATCCTGAAAGTTCAACTGGATGGAGGGGTTTCGAAAGGAGCATGTTTTGGTTAGTGGTAATTGCTGGCAGCTTGGTTCTAGTGCATGCTTTCCTTCTCCTAGTAATGAAGTCAAGGAAGCGTAATGAGAAAGGGAAAACTTGTGGCGCTTTAGTTTTTCCTCGATTTGAGATCTTTCTTTTGATTGTTTCTGTTCCTTGTATCTGTCTTGCATCAGCTGCTGTAATCAAAGGGAGAACAACTTTAGGGACTGTAATCGGAGTTCTGTTATTGATTTTCACATCTTCCCTGCTGGTATTCTTACTCATGTTCCTCACAATTGGGATCACATTGGGGAAGTTACTTCAATACAAAGAAATTCATCAAGTGGACCAGAAGTTCCATTGGTACCAAGAGTTAGTCCGGGTGACCCTTGGCCCTGGTAAACGAGGCCAATGGACATGGAGAAATGAAGCCAACTCGAAAAAATTAGCCAAGTATGGGCCTATGTTCGAGGATCTCAGAGGACCCCCAAAGTACATGCTCTCAATGATTACTGCTGGCAGCCACATGCCAGTTGGTCGAATCATTGCCTCTGACGATGAGACTGAAGATGCAGAGGCCCCTCTTATTCAGAAATTGTTTGGTATCTTGAGGATATACTACACCTTGCTTGAATCCCTACGGAGGTTTCTCTTGGGAATCCTTGCTGGTCTACACTTGGAAAACTCCTCTTCTTCAAAGGCTCCAACTGTCGTGTTGCTAAGCATTACTTCATTCCAGCTTTTCTTCTTAGTCCTTAAGAAGCCTTACATCAAGAAGAAGGTGCAGCTAGTTGAGATCATTTCAATCGCTTGTGAAGTGGGGATGTTTGCTACTTGCATGGTTCTCTTGGAGAGGGAATTCTCAATGCCGGTTGAGAGAGGAATCGGTATATTCATGCTCTGTCTCTTCATGCTTGGTTTTCTCGCGTTAATGTGCAATGAGTGGTATGCTTTGTGTAAGCAAATAAGGAAGCTAGACGCATCACAGAACTCGTTTCTAGTTGGTCTTAAAACTGCTTTAATAGGGTTTTTCCTGCTCTTTGCTCCTGAGAAAATGGTCAAAGACATTGATGATTGGTTGCCAGAGGATAAAGCAGGGAGATCAAGTGGAGAATCAAATATGTTGAACACAACGCCAACCAGTCGGTTCAGGAGTTCAGAGAGTAGGAGCTCCGCGAGTAGGAGCTCCAGCACCTCAGATAAACCATGGATTAGACAGTTGAGAGAAATGGCTAAGGCAAGCTTTAAACAAGGAAATGGAAATGAAAATGGAAATGCAGTAAATGACCCTTCAAGTAGTAATACCAGATGGAGTGGCTTTTGGCGCGGGAAATTAAGTGGGAGTTCATCAAAGAACTCATCAAATGATTACAAGTCCAGGCCAAAGAGTTTGTACAAAGATTTGGAAGCTATTTTCGCATCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_643.p1 GENE.S_Transcript_643~~S_Transcript_643.p1 ORF type:complete len:1098 (+),score=163.59 S_Transcript_643:721-4014(+)
MGLRRIQWGGLLLCWGFCILCFKALGDVPQVSVKFPQAPSLFSHLNSATFVFEALVPNSRENCSNCSFNCKLDDAISPDCRQRNVSFVGLQDGNHSFKVCTNAPQGVGCASYNWAVDTVHPTAYISASTSFTNAANVTVNISFSEPCTGGGGFTCSSVDACNLLVYGAGQVIPNTLKTIQPYLQYSVVVALSTKAKYGRVILAMDKGFCTDEAGNRFIRPANATFVHFDRRSVFVSLRTHVPERLLQLGGETRTVQATNSNKNLKVYLYFTEPVLNTSTEIMKSIDISQGSLRPINGSSLANRRFGFLIEDIPSVTAITVSLNSSFVISRQGAPVSPVAPATFLYDSKRPVVRLSTTSKMRTRDRSIAVSIKFMKPVFDFNATHMLISGGHIESFKQISRISYVALIQAYDGILSIRVPENVTADVAGNPNLASNVIEVRHSDSLPMMSTVFSIFVTTLFVATCVVAGFLTISTASLQAAGAFPRSSSSLTSNPTRNLFRIACYIQVFALSRWLAVTLPVEYYEFTRGIEWSVPYLSLPWEGDHSQPMVFSSNTSSSSSFLSTKIKNSSEVQTVQLNKGSFDKAGVVYGAPLTAMEYQTYFESQNYIPEAEYIADPESSTGWRGFERSMFWLVVIAGSLVLVHAFLLLVMKSRKRNEKGKTCGALVFPRFEIFLLIVSVPCICLASAAVIKGRTTLGTVIGVLLLIFTSSLLVFLLMFLTIGITLGKLLQYKEIHQVDQKFHWYQELVRVTLGPGKRGQWTWRNEANSKKLAKYGPMFEDLRGPPKYMLSMITAGSHMPVGRIIASDDETEDAEAPLIQKLFGILRIYYTLLESLRRFLLGILAGLHLENSSSSKAPTVVLLSITSFQLFFLVLKKPYIKKKVQLVEIISIACEVGMFATCMVLLEREFSMPVERGIGIFMLCLFMLGFLALMCNEWYALCKQIRKLDASQNSFLVGLKTALIGFFLLFAPEKMVKDIDDWLPEDKAGRSSGESNMLNTTPTSRFRSSESRSSASRSSSTSDKPWIRQLREMAKASFKQGNGNENGNAVNDPSSSNTRWSGFWRGKLSGSSSKNSSNDYKSRPKSLYKDLEAIFASK*

Click here to download the sequence:
Link to NCBI Protein BLAST