Transcript Information: S_Transcript_643.p2


Annotated TAIR IDAT3G52380.1
Annotated Gene Namechloroplast RNA-binding protein 33
Annotated Gene Symbol(s)CP33, PDE322
Annotation TypeOrtholog
Chromosome Positionchr3:19421619-19422855 | Forward length=329
E-Value1.4E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1127.44017626184
Replicate 2125.76486034836
Replicate 3164.53015029786
Condition 2: 8 Hour
Replicate 1191.32306013226
Replicate 2204.24015761315
Replicate 3176.78032603626
Condition 3: 24 Hour
Replicate 1112.04978093283
Replicate 2118.18069569622
Replicate 3119.26764846457


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_643.p2 GENE.S_Transcript_643~~S_Transcript_643.p2 ORF type:complete len:317 (+),score=87.38,RRM_1|PF00076.18|1.4e-20,RRM_1|PF00076.18|2e-15,RRM_6|PF14259.2|1.3e-12,RRM_6|PF14259.2|3.8e-08,RRM_5|PF13893.2|1e-06,RRM_5|PF13893.2|2.2e-05 S_Transcript_643:4881-5831(+)
ATGGCAGCAACCTCTGTTTCCTCCATTGTTATACCATCATCTTCTTCTTCATCCTCTCTCCTCCCATCTGACCACTCCTTCACCAACTTCTCACCTTATCTCCCATTTCTCAAACCAAAACTATTCAAAACCCTCATCCTTAAACCACAGAATTTCACTCTCTCTCCTCTCCCTTTGCTCTTCCCTTCTCCACTTTGTCGATGTTCTCCAGATTTCAACGAGACCCAAGAAAACCCAGAAGATGAAGAAGAGAAGGAGCCAGCAGAAGAATCAGAAGGAGATGAACAAGATGAAGATGAAGAAGTTGAAGAGATTAAAGGGTCATATTCAGTTGATGATTGTAAGCTTTATGTAGGGAATTTGCCTTATTCTATGACTTCTTCCCGGTTGTCTGAGACCTTTTCTGAGGCTGGTCAAGTTAGCTCTGCTGAGATTATATATGATAAAGTGACCGATAGGAGTAGAGGGTTTGGGTTTGTCACAATGGGGAGCATTGATGAGGCTAAGGAAGCCATTCGAATGTTTGATGGTTCTCAAATCGGAGGCCGAACTGTGAAGGTGAACTTCCCAGAAGTGCCAAGGGGAGGGGAGAGAAAAGTCATGGGGCCGAAAATCCGAATCAGCAATCAGAGCTTTGTAGATACTCCTCACAAGATCTATGCTGGTAATCTAGGATGGGGTGTCACAACACAAGGGCTTAAATATGCTTTTGCGGAGCAACCTGGGTTTTTGAGTGCTAAGGTGATTTATGAAAGAGATAGTGGAAGGTCCAGAGGCTTCGGCTTTATCTCATTTTCATCTGCTGAGGCTGCAGAATCTGCTCTGAATTCTATGAATGGAGCTGAATTGGAAGGACGACCTTTACGATTGAATATGGCAGCTGACAGATCTCGTTCTAACACTGAAGCCTCTGCTGAGCAGAATGAAGTACTTTCTGCTTTTAGCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_643.p2 GENE.S_Transcript_643~~S_Transcript_643.p2 ORF type:complete len:317 (+),score=87.38,RRM_1|PF00076.18|1.4e-20,RRM_1|PF00076.18|2e-15,RRM_6|PF14259.2|1.3e-12,RRM_6|PF14259.2|3.8e-08,RRM_5|PF13893.2|1e-06,RRM_5|PF13893.2|2.2e-05 S_Transcript_643:4881-5831(+)
MAATSVSSIVIPSSSSSSSLLPSDHSFTNFSPYLPFLKPKLFKTLILKPQNFTLSPLPLLFPSPLCRCSPDFNETQENPEDEEEKEPAEESEGDEQDEDEEVEEIKGSYSVDDCKLYVGNLPYSMTSSRLSETFSEAGQVSSAEIIYDKVTDRSRGFGFVTMGSIDEAKEAIRMFDGSQIGGRTVKVNFPEVPRGGERKVMGPKIRISNQSFVDTPHKIYAGNLGWGVTTQGLKYAFAEQPGFLSAKVIYERDSGRSRGFGFISFSSAEAAESALNSMNGAELEGRPLRLNMAADRSRSNTEASAEQNEVLSAFSS*

Click here to download the sequence:
Link to NCBI Protein BLAST