Transcript Information: S_Transcript_64326.p1


Annotated TAIR IDAT1G17980.1
Annotated Gene Namepoly(A) polymerase 1
Annotated Gene Symbol(s)PAPS1
Annotation TypeOrtholog
Chromosome Positionchr1:6187742-6191418 | Reverse length=713
E-Value1e-313
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.776233990348
Replicate 234.599781523924
Replicate 336.764456838569
Condition 2: 8 Hour
Replicate 122.164972613083
Replicate 223.164551937985
Replicate 321.819371564154
Condition 3: 24 Hour
Replicate 146.183867852162
Replicate 239.170918433136
Replicate 341.606443329699


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_64326.p1 GENE.S_Transcript_64326~~S_Transcript_64326.p1 ORF type:complete len:762 (+),score=144.17,PAP_central|PF04928.13|7.4e-110,PAP_RNA-bind|PF04926.11|3.6e-12,PAP_RNA-bind|PF04926.11|7.4e-06,PAP_RNA-bind|PF04926.11|4.1e+03,NTP_transf_2|PF01909.19|2e-11 S_Transcript_64326:738-3023(+)
ATGGCGAGCTCTGGAGCTAATAGTCGATATAACTCACAGCGCTTAGGCATAACAGACCCTATCTCATTAGGGGGACCATCAGAGTACGACATGATCAAAACTCGGGAACTTGAAAAGTACTTGGAGAATGTGGGATTGTATGAGAGTCAGGGGGAGGCTGTTTCTAGGGAGGAAGTGCTTGGGAGACTAGACCAGATTGTGAAGGTTTGGGTGAAAACAATTAGTCGTGCCAAGGGATTGAATGAGCAGTTGGTGCAAGAAGCAAATGCAAAGATCTTCACATTTGGTTCATACAGGCTTGGGGTACATGGTCCTGGAGCCGATATAGACACACTATGTGTGGGGCCTAGGCATGCTACGCGTGATGAAGATTTCTTTGGTGAACTTCATAGGATGCTATCTGAGATGCCGGAAGTTTCAGAATTGCACCCTGTACCCGATGCCCATGTTCCGGTGATGAAATTCAAGTTTAGTGGTGTCTCTATAGATCTTCTTTATGCAAAATTGGCACTTTGGGTGATTCCTGAAGATCTAGATATCTCCCAAGATTCAATATTGCAAAATGCAGATGAGCAGACTGTTCGTAGTCTTAATGGTTGTAGAGTTACAGATCAAATACTGCGCTTGGTCCCAAATATACAGAACTTCCGTACAACACTAAGATGCATGAGATTTTGGGCAAAACGACGTGGTGTCTATTCAAATGTTGCTGGGTTTCTTGGTGGTATTAATTGGGCTCTACTTGTTGCTCGAATTTGTCAGCTATACCCCAATGCATTGCCCAATATGTTAGTGTCACGGTTTTTTAGGGTTTATACTCAGTGGAGGTGGCCAAATCCTGTTATGCTTTGTGAGATTGAAGAGGGATCTCTTGGTCTGCAAGTTTGGGATCCTAGGAGGAATCCGAAGGACAGATACCATTTGATGCCTATAATAACTCCTGCATATCCATGCATGAACTCTAGTTATAATGTCTCATCTAGTACTCTGCGGATTATGTCGGAAGAGTTCCAGAGGGGATGTGAAATGTGCGAGGCTATGGAGGCTAGTAAGGCTGATTGGGATACACTTTTTGAGCCATATCCCTTTTTTGAAGCATATAAGAACTATCTGCAGATAGACATTAATGCTGAAAATGCCGATGACTATCGAAAGTGGAAGGGATGGGTGGAGTCTCGTCTTCGTACACTTACATTAAAGATAGAGAGGCATACTTATAACATGCTTCAGTGCCATCCTCACCCTGGTGAATTCTCAGATAAATCCAAACCTTTTCATTGCTGCTATTTCATGGGTTTGCAACGTAAAAAGGAGGTTCCAGGTGCTGAAGGTGAACAGTTTGATATAAGGATGACTGTGGAAGAATTTAAGCAAACTGTTAATATGTATACTTTGTGGAAGCCTGGAATGGAGATCCGTGTAAGCCATGTAAAACGGAGAAATATACCTGCCTTCGTATTCCCCGGGAGTATTAGACCTTCCCGTTCTACTAAATCGTCTGGAGAAAGTAGGCGATCTTTAGAGATGAAGAATTCTGGACATGCCATCCCAAACTTATCATCTGAAGGAAAATCTGGTAGTGATAAACTAGATGATACAAGGAAGAGAAAAAGGGAGAACGATGATACTTTTTCTAGTTTGAAAGTCACTGGGTGCTCGGCTTCTGTAGCTTCATCGAGTGGGGGGGTTCATGTGGGTAGTCCTGTCAGCACTGCCACTTCTTTAATGAAGGCAGATACAGAAACCAATGGATCTGGGGAGACAAAGGGAAATACAGGTGCAGAAATCACACATGTGAAGAGTGGTGAACTCAATGTGTCAGGGCAGCAAAGCCCACCTGTCAACACTTCATTGGCTCCAGCTTCTTCATCAACATCTAAAGAGGCTGAGAAGCTGGCAATTGAGAAGATCATGTCCGGTCCATATGCTGCTCACCAAGCTGTACCTGAACCTGATGAGCTTGAGTACAACTTGGAAGATGTTAATCAAGTCCAGCATTTTGGAAGTGGGAATAAGCAGATAGAAGATGGTTCTGCTGTGAAGGCATCTGAGGAAGTGGCCGTGCCTGACACTATTGTTTCTCACTCTGCTTCATATAGCAGTGGGGCCTTGGAGGAGCTTGAGGTCGTGTTCTTTTCTTGCACCGCTTTATTACGGTTATATATGATCGTCAATGTGCAATTTAATTTGGATATCCTGCATACAATATTCTTTTTCACCTTTGTACTCAAGCAAGCTCATTTCCGTGTTGACCCATATATCCATCTCAAATTGAAGTGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_64326.p1 GENE.S_Transcript_64326~~S_Transcript_64326.p1 ORF type:complete len:762 (+),score=144.17,PAP_central|PF04928.13|7.4e-110,PAP_RNA-bind|PF04926.11|3.6e-12,PAP_RNA-bind|PF04926.11|7.4e-06,PAP_RNA-bind|PF04926.11|4.1e+03,NTP_transf_2|PF01909.19|2e-11 S_Transcript_64326:738-3023(+)
MASSGANSRYNSQRLGITDPISLGGPSEYDMIKTRELEKYLENVGLYESQGEAVSREEVLGRLDQIVKVWVKTISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLSEMPEVSELHPVPDAHVPVMKFKFSGVSIDLLYAKLALWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFQRGCEMCEAMEASKADWDTLFEPYPFFEAYKNYLQIDINAENADDYRKWKGWVESRLRTLTLKIERHTYNMLQCHPHPGEFSDKSKPFHCCYFMGLQRKKEVPGAEGEQFDIRMTVEEFKQTVNMYTLWKPGMEIRVSHVKRRNIPAFVFPGSIRPSRSTKSSGESRRSLEMKNSGHAIPNLSSEGKSGSDKLDDTRKRKRENDDTFSSLKVTGCSASVASSSGGVHVGSPVSTATSLMKADTETNGSGETKGNTGAEITHVKSGELNVSGQQSPPVNTSLAPASSSTSKEAEKLAIEKIMSGPYAAHQAVPEPDELEYNLEDVNQVQHFGSGNKQIEDGSAVKASEEVAVPDTIVSHSASYSSGALEELEVVFFSCTALLRLYMIVNVQFNLDILHTIFFFTFVLKQAHFRVDPYIHLKLKCL*

Click here to download the sequence:
Link to NCBI Protein BLAST