Transcript Information: S_Transcript_64784.p1


Annotated TAIR IDAT2G30780.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13116547-13118059 | Forward length=452
E-Value2.2E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6935656723864
Replicate 23.4097038407068
Replicate 33.8562084538438
Condition 2: 8 Hour
Replicate 14.3038515003668
Replicate 23.7015240476639
Replicate 34.0693890882237
Condition 3: 24 Hour
Replicate 13.8923610583241
Replicate 23.3377613412439
Replicate 33.210078378833


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_64784.p1 GENE.S_Transcript_64784~~S_Transcript_64784.p1 ORF type:5prime_partial len:550 (+),score=79.35,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|60,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|0.082,PPR|PF01535.16|3.7e+02,PPR|PF01535.16|6.3e-05,PPR|PF01535.16|0.24,PPR|PF01535.16|0.031,PPR|PF01535.16|0.0052,PPR|PF01535.16|55,PPR|PF01535.16|47,PPR|PF01535.16|8.4e+03,PPR|PF01535.16|7,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|5.5e+02,PPR_3|PF13812.2|7,PPR_3|PF13812.2|17,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|7.2,PPR_3|PF13812.2|2e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|42,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|2.6e+03 S_Transcript_64784:1-1650(+)
CCTCAATGTTCTTTCTTCAACCATTCTCTTTTCCCTTCCTCTCCACCCTACCATGAACAAAACCAGCTTAATTACTTCCACTTCAAGAAGACAAATACAATGAGACGAGCTTGGAGTTTGAGGATCTCATCAGACCCTCAAAGGGCAGCAGAGCTATTAATCCAAACAAGAAGAACAAAGACCTCCTCTAGTCTTGCCAAACTCAAAACCATTAAACCCTCTTATTTCCCAAAACCCACTGTCCCTCTCAGATTTGCACCCTTTTCATCTTCCTTGAATACCCCGTACAATTACCTTCTTGGGTTGTTTGCAAAATCGTATTTTTTTGACCCACAAATCAAACAGGAACTTACCCTCAAGGTTTCTGGTCTCAAAGATGAGTTGCTTAAGTTTAAAGGTGATTCTCAGGGCGTCTTTAATGTCTTAGATGAAAAGGGTTTCCCTTTGTTTTCTACTTACGAAGATGGGTCTGCTTTTACTGAGCTCTTGGACCAGCTCTCTAGTTTCCCTTCTTTAGCCATTGAGGTTATCAACTGGAGGAGAAAACGTGCCAGCATTAGCTTCCCTATTCAAGCTGAGGAGTATTCAAAGGGAATTTCAACTGCTGGCAGGGCTAAGAAGGTTGAACTTGCATATGAGTTGTTCACAGAGGCTGCTAACAATCATGTGAAGACGTCACAAATTTACAACGCGTTAATGGGTGCTTATATGAGCAATGGCCTGTCCGAGAAATGTCAGTCACTGTTTCGGGAATTAAAGAAAGAAAGCAAATGTAGACCTACGATCGTCACCTACAACATTCTTATATCTGTCTTCGGTCGTTTAATGTTGGTTGACCATATGGAAGCAACACTCCAGCAGGTTTATGGTTCTAATCTCTCCCCTACTGTAAACACATTCAATAATTTGATTGCTGGATATGTAACAGCCTGGATGTGGGATCGCATGGAGAACACCTATAAGACGATGAAAGAAAGGCTCGTGAAGCCTAATACTACCACTTACGTGTTGATGGTCAGAGGCTATTCCCATTGTGGTCAGCTGGAGAAGATGGAAGCAATGTATGAGCTGATTAAAGAAAGTGCAGACAAGAATAATGTAAACGTAATCACATGCATGATATGTGCATATTGTAAGAGTTCGAGTGGAAATAGAATTAAAAAGATCGACAAACTGTTGAAGAAGATACCAGAGGAGCAATATTCTTCTGGGTTGAACGTGTTACTTATTAAGGTTTATGCACAAGAACGACTTCTTGATAAAATGGAAAAGTATATTGATGTTGCTTTTGAGCATCATACCACTGTGAGGGCTTTGGGCATCATGCGTTCGATAATTACAGCTTATTATAGGTGTAATGCCGTTGACAAGCTCGCTTGCTTTGTGAAACGTGCGGAGGATGCAGGATGGGGAATTGGCAGGTCCCTCTATCACTGTAAAATGGTGATGTATGGATCACAAAACCGGCTGGAGGAAATGGAAAACGTACTGACTGAAATGGAGAAATTCAATATAAGTGTAACAAAGAAAACATTTGTTATTCTGTACAAAGCTTACTCACTTTGGGGTCCCAGATGTAAACTTGAGCAAGTAGTTGGCATGATGTGCAAGCATGGACATGGAATTCTTTTGGATGGTTGCCCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_64784.p1 GENE.S_Transcript_64784~~S_Transcript_64784.p1 ORF type:5prime_partial len:550 (+),score=79.35,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|60,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|0.082,PPR|PF01535.16|3.7e+02,PPR|PF01535.16|6.3e-05,PPR|PF01535.16|0.24,PPR|PF01535.16|0.031,PPR|PF01535.16|0.0052,PPR|PF01535.16|55,PPR|PF01535.16|47,PPR|PF01535.16|8.4e+03,PPR|PF01535.16|7,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|5.5e+02,PPR_3|PF13812.2|7,PPR_3|PF13812.2|17,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|7.2,PPR_3|PF13812.2|2e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|42,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|2.6e+03 S_Transcript_64784:1-1650(+)
PQCSFFNHSLFPSSPPYHEQNQLNYFHFKKTNTMRRAWSLRISSDPQRAAELLIQTRRTKTSSSLAKLKTIKPSYFPKPTVPLRFAPFSSSLNTPYNYLLGLFAKSYFFDPQIKQELTLKVSGLKDELLKFKGDSQGVFNVLDEKGFPLFSTYEDGSAFTELLDQLSSFPSLAIEVINWRRKRASISFPIQAEEYSKGISTAGRAKKVELAYELFTEAANNHVKTSQIYNALMGAYMSNGLSEKCQSLFRELKKESKCRPTIVTYNILISVFGRLMLVDHMEATLQQVYGSNLSPTVNTFNNLIAGYVTAWMWDRMENTYKTMKERLVKPNTTTYVLMVRGYSHCGQLEKMEAMYELIKESADKNNVNVITCMICAYCKSSSGNRIKKIDKLLKKIPEEQYSSGLNVLLIKVYAQERLLDKMEKYIDVAFEHHTTVRALGIMRSIITAYYRCNAVDKLACFVKRAEDAGWGIGRSLYHCKMVMYGSQNRLEEMENVLTEMEKFNISVTKKTFVILYKAYSLWGPRCKLEQVVGMMCKHGHGILLDGCPS*

Click here to download the sequence:
Link to NCBI Protein BLAST