Transcript Information: S_Transcript_64806.p1


Annotated TAIR IDAT1G54150.1
Annotated Gene NameE3 Ubiquitin ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20215480-20217303 | Forward length=383
E-Value1.6E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.392546895485
Replicate 218.266449209713
Replicate 316.235126776835
Condition 2: 8 Hour
Replicate 122.229459233321
Replicate 221.144465422584
Replicate 321.103220696204
Condition 3: 24 Hour
Replicate 117.70470607093
Replicate 213.846967172581
Replicate 316.479240982894


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_64806.p1 GENE.S_Transcript_64806~~S_Transcript_64806.p1 ORF type:complete len:401 (+),score=68.84,GIDE|PF12483.4|1.6e-34,zf-C3HC4_3|PF13920.2|4.5e-13 S_Transcript_64806:71-1273(+)
ATGTCATCGGCAGGAGAGCAAGCAGCGGCAGCGATAGTAACGCAAGTAGCCCTAGCAGCTGACGGAGCAGTTCTAGGGCTAGCGCTAGCCTACGTGGCAGTTCGAAGTTTCATCAAATTCGCTAATTCATCCTCAGCCTTGAGGAAAATCGCCGACGCTCCTTTCGAACATGTTTCCGATCTCCGATCAGTTCTTAACGCCGGAGGTGAAGAGCAAACAGATGGAGATGGAGGAGGAGAGAGAGTGTTGGAGAGACTGGTGGTTGTGAGAGGAATCGTTGAGTCGAAATCGGCTGTTAAAGGAAGCTGGAAAACCTTGTGGCCTAATGACGTTCTTGTTTCGGCTGATTCCGGTGAACGTGCTGTCGTCATTCAGCGCTCTCAAAAGTGTATATACAACGAATGGAGAGGATTTTTCGGATGGTATCCTGATGTCCGTGCAGTCCTGGCAAAAGCCTGGAGAGAACAAGGAACTAGTTCTGTGAGAACGGTCCCATTTGTTCTTGTTGGAGATCGTCAACAGCCACAATCTGATTATATTGTTGTTGACCTGGATGGTTCAAATCATCCACTGCCTCTGACAACAGTCTACCATAAAATGCAACCAATTCAAGCAACTCCTTACACCTTTCTGCAGGCGCTCTTTGGACATGAATACCCAGTTGGCATGCTTGATGAGGAGAAAATCCTTCCGCTTGGGAAGGATGTCACTGCAGTTGGAATTTTCTCTTTAAGAGACAGTGTTCCAGAGATTAAGTCATGCAAAGATCTTCCTTACTTTCTGTCTGGACTAACCAAGGATCAGATGGTGGTTGAACTCTCTTTTAGGTCGAAGATCTTACTATGGAGTGGTATTATTGTTGGGTCGGTGTCACTTGGCATACTTGGGTATGCAATTGTGAGGAACTGGAACAAGTGGAAAGAATGGCGGGAGAGAAGGAGAGCTCAACAGCAAGGCCCTACTGCTGCTGCCGCTATCAGTGACAGTGAACCTGAAATTGTGGAAGAAGATGAGTCGGGAGATGTTCCTGATGGACAGTTATGCATAATCTGCCTTATGAGAAGGCGGCGATCTGCATTTGTACCCTGTGGACACCTGGTTTGTTGCCAGCGATGCGCCCTATCTGTGGAGCGAGATTTGGCACCAAAATGTCCAGTATGCAGGCAGGCAATCCGTAGTTCTGTGAGGATATATGATTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_64806.p1 GENE.S_Transcript_64806~~S_Transcript_64806.p1 ORF type:complete len:401 (+),score=68.84,GIDE|PF12483.4|1.6e-34,zf-C3HC4_3|PF13920.2|4.5e-13 S_Transcript_64806:71-1273(+)
MSSAGEQAAAAIVTQVALAADGAVLGLALAYVAVRSFIKFANSSSALRKIADAPFEHVSDLRSVLNAGGEEQTDGDGGGERVLERLVVVRGIVESKSAVKGSWKTLWPNDVLVSADSGERAVVIQRSQKCIYNEWRGFFGWYPDVRAVLAKAWREQGTSSVRTVPFVLVGDRQQPQSDYIVVDLDGSNHPLPLTTVYHKMQPIQATPYTFLQALFGHEYPVGMLDEEKILPLGKDVTAVGIFSLRDSVPEIKSCKDLPYFLSGLTKDQMVVELSFRSKILLWSGIIVGSVSLGILGYAIVRNWNKWKEWRERRRAQQQGPTAAAAISDSEPEIVEEDESGDVPDGQLCIICLMRRRRSAFVPCGHLVCCQRCALSVERDLAPKCPVCRQAIRSSVRIYDS*

Click here to download the sequence:
Link to NCBI Protein BLAST