Transcript Information: S_Transcript_64967.p1


Annotated TAIR IDAT1G28120.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9813219-9815143 | Reverse length=306
E-Value2E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.80043023844
Replicate 258.834105486706
Replicate 354.194188879965
Condition 2: 8 Hour
Replicate 167.771952399432
Replicate 267.911954770432
Replicate 367.534675745232
Condition 3: 24 Hour
Replicate 157.970240978276
Replicate 255.522671078624
Replicate 351.750084637034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_64967.p1 GENE.S_Transcript_64967~~S_Transcript_64967.p1 ORF type:complete len:309 (+),score=64.54,Peptidase_C65|PF10275.5|3.4e-85 S_Transcript_64967:357-1283(+)
ATGGAGAATCAGGAGGAGAATTTGAAATTGAATCTGGAAGAATCCAATTCCAAGCCTGCTGGCGTAATCGACGACGACTGGAAGAAGTTTAGGGACGATGATATCATGCATCAACATTCAGCTATTCGAGCCGAACAGGCCCACAAAATCCGTTTTGTTGGCGACAAGGAACCTCTTTCTGTGCTGGCTGCAGAATACCATTTAGGAAGTCCTATTTTGGTTGAAAAGATAAAGCTTCTTGATGATCAGTACTCTGCAATTAGGCGAACACGAGGAGATGGAAATTGCTTTTTCCGGAGTTTTATGTTCTCATATTTGGAGCACATTCTTGAAACACAAGACAAAGCTGAGGTTGATCGTGCCAAGGCCAATGTTGAAGAATGTCGAAAGACACTCCAGACTCTTGGTTATGCAGACTTCACATTTGAAGATTTTTTCGCGTTATTTCTTGAGCAGCTGGAAAGTGTCGTTCAAGGGACAGATTCTTCAATAAGTCATGATGAGCTTGTGGAGAGGAGTCGGGATCAATCAATATCTGACTATGTTGTAATGTTCTTTAGATTTGTCACGTCTGGGGAGATACGAAAACGTTCAGAGTTCTTTGAGCCTTTCATATTAGGATTGACAAATGCCACTGTGGATCAGTTCTGCAAATCTTCAGTGGAGCCTATGGGTGAAGAAAGCGATCATGTTCATATTATTGCTCTATCAGATACACTAGTTGTTCCAATTCGTGTGGTGTACCTGGATCGTAGCTCATGTGAGAGTGGTGGAATTAATGTAAATCATCATGATTTCATACCTGTTGCTTGGTCTAATGTTGCTGGAGAAGGTGGATCTGAGATCAAGCCCTACATAACTCTGTTGTATCGTCCAGGTCACTATGACATCCTTTACCCTAAACAATGCGGCACTGATGCTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_64967.p1 GENE.S_Transcript_64967~~S_Transcript_64967.p1 ORF type:complete len:309 (+),score=64.54,Peptidase_C65|PF10275.5|3.4e-85 S_Transcript_64967:357-1283(+)
MENQEENLKLNLEESNSKPAGVIDDDWKKFRDDDIMHQHSAIRAEQAHKIRFVGDKEPLSVLAAEYHLGSPILVEKIKLLDDQYSAIRRTRGDGNCFFRSFMFSYLEHILETQDKAEVDRAKANVEECRKTLQTLGYADFTFEDFFALFLEQLESVVQGTDSSISHDELVERSRDQSISDYVVMFFRFVTSGEIRKRSEFFEPFILGLTNATVDQFCKSSVEPMGEESDHVHIIALSDTLVVPIRVVYLDRSSCESGGINVNHHDFIPVAWSNVAGEGGSEIKPYITLLYRPGHYDILYPKQCGTDAP*

Click here to download the sequence:
Link to NCBI Protein BLAST