Transcript Information: S_Transcript_65010.p2


Annotated TAIR IDAT1G78915.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29667729-29671081 | Reverse length=405
E-Value1.4E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.451322609835
Replicate 222.500543318577
Replicate 329.347369720333
Condition 2: 8 Hour
Replicate 125.72586768416
Replicate 225.479049839689
Replicate 323.26134163242
Condition 3: 24 Hour
Replicate 125.572383451291
Replicate 229.139186312447
Replicate 326.122831705299


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65010.p2 GENE.S_Transcript_65010~~S_Transcript_65010.p2 ORF type:complete len:252 (+),score=62.90,TPR_16|PF13432.2|1.7e-08,TPR_16|PF13432.2|13,TPR_16|PF13432.2|0.28,TPR_11|PF13414.2|0.00014,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|0.028,TPR_19|PF14559.2|0.01,TPR_19|PF14559.2|0.00054,TPR_19|PF14559.2|0.16,TPR_19|PF14559.2|6.3,TPR_19|PF14559.2|17,TPR_14|PF13428.2|0.039,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|17,TPR_14|PF13428.2|29,TPR_8|PF13181.2|71,TPR_8|PF13181.2|0.27,TPR_8|PF13181.2|3.2e+03,TPR_8|PF13181.2|0.1,TPR_8|PF13181.2|7.6e+02,TPR_12|PF13424.2|2.6,TPR_12|PF13424.2|0.28,TPR_12|PF13424.2|0.1,TPR_12|PF13424.2|0.35,TPR_17|PF13431.2|1.8e+03,TPR_17|PF13431.2|2.2,TPR_17|PF13431.2|1.6e+02,TPR_17|PF13431.2|9.6e+03,TPR_17|PF13431.2|0.043,ANAPC3|PF12895.3|0.0086,ANAPC3|PF12895.3|0.00067,ANAPC3|PF12895.3|19,TPR_2|PF07719.13|4.5,TPR_2|PF07719.13|2.1,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|1.2e+02,TPR_2|PF07719.13|6.6e+02,TPR_6|PF13174.2|6.5,TPR_6|PF13174.2|1.1e+02,TPR_6|PF13174.2|2.3e+03,TPR_6|PF13174.2|0.21 S_Transcript_65010:1181-1936(+)
ATGGTGCTTGTCCAAGTTTTGCCAATCAAGGTAAGTCAGGTTGGGTCCATGTTGAACAAATTGGGTTTGGGTTGCTTTTTGAAGTCCTTTCTTCTAACTTGTACACTTAGTTGTGACAACTGCTATCACGATCTATATGAAGTTATCTTGCAGGGAGCTGCAGTGACTCTAGCAGAACTTGGAGAATATACTCGGGCAGCTAGTTTCCTGGAGGATTTGGTAAAGGAGAAGCCAAGTGACCCAGATGTCTTTCGCCTGCTTGGGGAGGTAAAATATGAGCTCAAAGATTATGAAGCAAGTGCTGCAGCATACAAGAGTTCAGCAAAGGTGTCAAATACTATGGATTTTGAAGTTCTGCGTGGTCTTACAAATGCTTTGCTTGCTGCCAAGAAGCCTGATGAGGCTGTTCAAGTCCTTCTGGAATCGCGTGAACGTCTCAATAAGGAAAAATCAAGTGATAGCAGCATGAAGACACAAAGCAGCATAACTGTTAATGACGCCCAGAGTTTGGACCCAATTCAAGTTGAACTGCTGCTTGGAAAAGCATACTCAGATTGGGGCCATATCAGTGATGCTGTATCTGTTTATGATCAATTAATATCTAGTCATCCAAATGACTTCCGGGGATACTTAGCTAAGGGTATATTATTGAAAGAAATTGGCAATGTGGGAGATGCTGAAAGGATGTTTATTCAAGCACGCTTCTTTGCCCCTGAGAAGGCAAAAGCACTTGTGGATCGTTTTTCTAGAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65010.p2 GENE.S_Transcript_65010~~S_Transcript_65010.p2 ORF type:complete len:252 (+),score=62.90,TPR_16|PF13432.2|1.7e-08,TPR_16|PF13432.2|13,TPR_16|PF13432.2|0.28,TPR_11|PF13414.2|0.00014,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|0.028,TPR_19|PF14559.2|0.01,TPR_19|PF14559.2|0.00054,TPR_19|PF14559.2|0.16,TPR_19|PF14559.2|6.3,TPR_19|PF14559.2|17,TPR_14|PF13428.2|0.039,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|17,TPR_14|PF13428.2|29,TPR_8|PF13181.2|71,TPR_8|PF13181.2|0.27,TPR_8|PF13181.2|3.2e+03,TPR_8|PF13181.2|0.1,TPR_8|PF13181.2|7.6e+02,TPR_12|PF13424.2|2.6,TPR_12|PF13424.2|0.28,TPR_12|PF13424.2|0.1,TPR_12|PF13424.2|0.35,TPR_17|PF13431.2|1.8e+03,TPR_17|PF13431.2|2.2,TPR_17|PF13431.2|1.6e+02,TPR_17|PF13431.2|9.6e+03,TPR_17|PF13431.2|0.043,ANAPC3|PF12895.3|0.0086,ANAPC3|PF12895.3|0.00067,ANAPC3|PF12895.3|19,TPR_2|PF07719.13|4.5,TPR_2|PF07719.13|2.1,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|1.2e+02,TPR_2|PF07719.13|6.6e+02,TPR_6|PF13174.2|6.5,TPR_6|PF13174.2|1.1e+02,TPR_6|PF13174.2|2.3e+03,TPR_6|PF13174.2|0.21 S_Transcript_65010:1181-1936(+)
MVLVQVLPIKVSQVGSMLNKLGLGCFLKSFLLTCTLSCDNCYHDLYEVILQGAAVTLAELGEYTRAASFLEDLVKEKPSDPDVFRLLGEVKYELKDYEASAAAYKSSAKVSNTMDFEVLRGLTNALLAAKKPDEAVQVLLESRERLNKEKSSDSSMKTQSSITVNDAQSLDPIQVELLLGKAYSDWGHISDAVSVYDQLISSHPNDFRGYLAKGILLKEIGNVGDAERMFIQARFFAPEKAKALVDRFSRS*

Click here to download the sequence:
Link to NCBI Protein BLAST