Transcript Information: S_Transcript_65015.p1


Annotated TAIR IDAT1G78915.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29667729-29671081 | Reverse length=405
E-Value1.7E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7643778106243
Replicate 210.925323675116
Replicate 310.684373548432
Condition 2: 8 Hour
Replicate 113.277105990715
Replicate 211.831266107548
Replicate 313.988524990769
Condition 3: 24 Hour
Replicate 113.390493485821
Replicate 210.896063257859
Replicate 311.883463229334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65015.p1 GENE.S_Transcript_65015~~S_Transcript_65015.p1 ORF type:complete len:416 (+),score=118.29,TPR_16|PF13432.2|0.00013,TPR_16|PF13432.2|4e-08,TPR_16|PF13432.2|0.031,TPR_16|PF13432.2|0.67,TPR_19|PF14559.2|2.9e-05,TPR_19|PF14559.2|0.29,TPR_19|PF14559.2|9.4,TPR_11|PF13414.2|0.00018,TPR_11|PF13414.2|2e+02,TPR_11|PF13414.2|0.062,TPR_14|PF13428.2|0.08,TPR_14|PF13428.2|9.4,TPR_14|PF13428.2|35,TPR_14|PF13428.2|61,TPR_17|PF13431.2|50,TPR_17|PF13431.2|4.7,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.086,TPR_12|PF13424.2|13,TPR_12|PF13424.2|0.33,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|0.81,TPR_8|PF13181.2|1.4e+02,TPR_8|PF13181.2|0.53,TPR_8|PF13181.2|5.9e+03,TPR_8|PF13181.2|0.2,TPR_8|PF13181.2|1.5e+03,TPR_2|PF07719.13|3.4,TPR_2|PF07719.13|4.1,TPR_2|PF07719.13|2.8e+02,TPR_2|PF07719.13|2.4e+02,TPR_2|PF07719.13|1.3e+03,TPR_6|PF13174.2|8.3,TPR_6|PF13174.2|2.2e+02,TPR_6|PF13174.2|4.8e+03,TPR_6|PF13174.2|0.41 S_Transcript_65015:320-1567(+)
ATGTGGGTTACAGCAATCCAATTGAATTTTCAAGGCCTTATCACAATTAAACCCTTCCATCGCAAATCTTCATCCTTTCAAATCCGTTGTTGCGATTCTAACCCTTCAACTCCTCGTGGGTTTGGCCCTCAAGATGACAACAATAATATTAATGTGAAGAAAAGAACCACCTCTAAGGACCAAAAGGGCATGCTTTTACAACAAAGAAATTCCACAAGTAGGCAGCCAGCCCCTGTGTCTGGTCAAGCACCTGGAGTGAGTTCAAGGCTTGACCAAAAGTATAAACAAAATTCTTCAGATCGCCAGTTTGAGGAAAGACTTCAAGCTGTGAAAAGGTTGGCGCTTGAGAAGAAAAAAGCAGAAGAAGAGAGCAACTTTGGAGCAATTGACTATGATGCACCAATTGAGCCAAAGCAGAACACTGTTGGGCTTGGCGCTAAGATTGGAGTCGGAATTGCTGTTGCGGTATTTGGCCTTGTTTTTGCTTTTGGAGATTTTCTTCCATCTGGGAGTGTAACATCCAGTGAGGATGATGGAGCATTCAGTAAAAAGTTGTCAAAAGAAGAGACATCAGCTCTTCAGAGTAGGCTTCAGCAATTTGAGGCAACCCTGAGCTCGTCTCCTAAAGATCCAATTGCTCTTGAAGGAGCTGCAGTGACTCTAGCAGAACTTGGAGAATATACTCGGGCAGCTAGTTTCCTGGAGGATTTGGTAAAGGAGAAGCCAAGTGACCCAGATGTCTTTCGCCTGCTTGGGGAGGTAAAATATGAGCTCAAAGATTATGAAGCAAGTGCTGCAGCATACAAGAGTTCAGCAAAGGTGTCAAATACTATGGATTTTGAAGTTCTGCGTGGTCTTACAAATGCTTTGCTTGCTGCCAAGAAGCCTGATGAGGCTGTTCAAGTCCTTCTGGAATCGCGTGAACGTCTCAATAAGGAAAAATCAAGTGATAGCAGCATGAAGACACAAAGCAGCATAACTGTTAATGACGCCCAGAGTTTGGACCCAATTCAAGTTGAACTGCTGCTTGGAAAAGCATACTCAGATTGGGGCCATATCAGTGATGCTGTATCTGTTTATGATCAATTAATATCTAGTCATCCAAATGACTTCCGGGGATACTTAGCTAAGGGTATATTATTGAAAGAAATTGGCAATGTGGGAGATGCTGAAAGGATGTTTATTCAAGCACGCTTCTTTGCCCCTGAGAAGGCAAAAGCACTTGTGGATCGTTTTTCTAGAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65015.p1 GENE.S_Transcript_65015~~S_Transcript_65015.p1 ORF type:complete len:416 (+),score=118.29,TPR_16|PF13432.2|0.00013,TPR_16|PF13432.2|4e-08,TPR_16|PF13432.2|0.031,TPR_16|PF13432.2|0.67,TPR_19|PF14559.2|2.9e-05,TPR_19|PF14559.2|0.29,TPR_19|PF14559.2|9.4,TPR_11|PF13414.2|0.00018,TPR_11|PF13414.2|2e+02,TPR_11|PF13414.2|0.062,TPR_14|PF13428.2|0.08,TPR_14|PF13428.2|9.4,TPR_14|PF13428.2|35,TPR_14|PF13428.2|61,TPR_17|PF13431.2|50,TPR_17|PF13431.2|4.7,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.086,TPR_12|PF13424.2|13,TPR_12|PF13424.2|0.33,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|0.81,TPR_8|PF13181.2|1.4e+02,TPR_8|PF13181.2|0.53,TPR_8|PF13181.2|5.9e+03,TPR_8|PF13181.2|0.2,TPR_8|PF13181.2|1.5e+03,TPR_2|PF07719.13|3.4,TPR_2|PF07719.13|4.1,TPR_2|PF07719.13|2.8e+02,TPR_2|PF07719.13|2.4e+02,TPR_2|PF07719.13|1.3e+03,TPR_6|PF13174.2|8.3,TPR_6|PF13174.2|2.2e+02,TPR_6|PF13174.2|4.8e+03,TPR_6|PF13174.2|0.41 S_Transcript_65015:320-1567(+)
MWVTAIQLNFQGLITIKPFHRKSSSFQIRCCDSNPSTPRGFGPQDDNNNINVKKRTTSKDQKGMLLQQRNSTSRQPAPVSGQAPGVSSRLDQKYKQNSSDRQFEERLQAVKRLALEKKKAEEESNFGAIDYDAPIEPKQNTVGLGAKIGVGIAVAVFGLVFAFGDFLPSGSVTSSEDDGAFSKKLSKEETSALQSRLQQFEATLSSSPKDPIALEGAAVTLAELGEYTRAASFLEDLVKEKPSDPDVFRLLGEVKYELKDYEASAAAYKSSAKVSNTMDFEVLRGLTNALLAAKKPDEAVQVLLESRERLNKEKSSDSSMKTQSSITVNDAQSLDPIQVELLLGKAYSDWGHISDAVSVYDQLISSHPNDFRGYLAKGILLKEIGNVGDAERMFIQARFFAPEKAKALVDRFSRS*

Click here to download the sequence:
Link to NCBI Protein BLAST