Transcript Information: S_Transcript_6514.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value8.7E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 162.676909269427
Replicate 249.270964665545
Replicate 345.324816064114
Condition 2: 8 Hour
Replicate 168.233713541215
Replicate 271.740115337639
Replicate 367.562951596001
Condition 3: 24 Hour
Replicate 140.293389336008
Replicate 242.925098957322
Replicate 343.536991844167


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6514.p1 GENE.S_Transcript_6514~~S_Transcript_6514.p1 ORF type:complete len:566 (+),score=153.36,Frigida|PF07899.7|1.9e+03,Frigida|PF07899.7|6.2e-110 S_Transcript_6514:304-2001(+)
ATGGAAGACACTCAGTCTGTTTCTGTACTCATAGACGCTGCAACATCGAAAATACAACAACTTCAAAAGGCATTTACTGAGCTTGAAAGTCACCGAGCTGTTACCCTAAATCTGAAATGGAAAGAGCTGGAAGCTCATTTCCATGGGCTAGAGAAGTCACTGAAGAGGCGCTTTCATGAGTTGGAAGATCAGGAGAAGGAATATGAAAGCAAGACCATGGAGGCACAAGAGATAATTGAGAAGCATAAAGCCGTTGTTGTGGCCAAGGAGCAGGCTTCGCTGGAAAAGCTTCAAGAGAAGAGGGATGCTGCCATGTTAGCTATTGCAACTGCTAGAGAGAAGCAACGGAGGGTATCAAGCGAATTTTATACTGTAGTCACCAGTGTGGGTCAAGTTGGAACAGCCATGGAAGAGACTCCTACCAATTCTATGATATCTGATATTACTTCAGAGGACATAAGTGGCTCGGTCGAATATGGAAGTCCTGAAGTGCAGTCAGCTGAAAGTGGAAATGGTGAGGCGATGTCTTATCCTGAGCTTGTCAAACTATGTGAAGAGATGGATGCAGAGGGTCTTCACAACTTCATATCTGACAACCGCAAGAACCTTGCATCAATGAGGGAGGAAATACCACAGGCACTGAAGGCTGCTGCTGACCCTGCTCATCTGGTTTTGGATTCACTGACCGACTTTTACAGGGGTGATGTCACAAACTTGGATGCAAAGAAGGATTCCAGTCTTTTGGGTCTGCGTCGAACCTGCATCATGTTGATGGAGTGCCTTAGCAGTTTGTTTATAAGCTTGGATGCAGTCTCTGTTTCTAATATAATATCTGAAGTTGTCAAGGTGCGAGCAAAATCTATTGCTGAAGCATGGAAGCCAAAGCTCAATGAACTTGACATGGAAGCTGGCAATGGAAACTCCTTGGAGGCTCATGCATTCTTACAGCTTCTGGCGACTTTTTCAATCGTATCTGATTTTGATGCAGAGGAACTAAAGAAACTGGTGCCTTTGGTGTCACGCCGTCGCCAGGCTGCTGAACTCTGCCGTTCTCTCGGGTTATCTGACAAAATGCCAGGTGTAATTGAAGTACTGATACACAGTGGCAGACAAATCGATGCTATCAATCTGGCTTTCCAGTTTGGACTGACTGAGCAGTTTCCACCTGTGCCTCTGCTGCAAAACTATCTGAAGGAAGCAAAGAAAGTTTCTTCACCAGCTAAGCCCGGGAACACATCACCACCATCTCCCAATGCTCAGAATAATGAGGTAAATGAACGAGAGCTCAGTGCACTGAAGGCTGTGATAAAATGTGTTGAAGAGCACAAGCTTGAGGAGCAGTTCCCTGTGGATTCCCTGGCAAAGCGTGTCCTCCAGCTTGAGAAGGCCAAAGCAGACAAGAAACGGGCAACGGAAGTGCCTAAGCCTCAATCCAAGAGGCCCCGAGCCACCAACACAGGTTATGGGCCTCGCTTCACTAACATTGCTCCCAACAACTCCCCCTATGCTGCTAGGCCAACAGATAGGTATCCTCCTCAGTATGTGTTTGACAACAGACCCTATGTTTACACTCCTGGACCTACTGACAATCACTGTGCTCCTGTCTTGGGTGCCCCTGCATATGCCTTCCCCCCTCCTGCGCATGCTAATTACTATGCGAATGGCTACCAGTACCAGGCCCCAGCCTACCTTCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6514.p1 GENE.S_Transcript_6514~~S_Transcript_6514.p1 ORF type:complete len:566 (+),score=153.36,Frigida|PF07899.7|1.9e+03,Frigida|PF07899.7|6.2e-110 S_Transcript_6514:304-2001(+)
MEDTQSVSVLIDAATSKIQQLQKAFTELESHRAVTLNLKWKELEAHFHGLEKSLKRRFHELEDQEKEYESKTMEAQEIIEKHKAVVVAKEQASLEKLQEKRDAAMLAIATAREKQRRVSSEFYTVVTSVGQVGTAMEETPTNSMISDITSEDISGSVEYGSPEVQSAESGNGEAMSYPELVKLCEEMDAEGLHNFISDNRKNLASMREEIPQALKAAADPAHLVLDSLTDFYRGDVTNLDAKKDSSLLGLRRTCIMLMECLSSLFISLDAVSVSNIISEVVKVRAKSIAEAWKPKLNELDMEAGNGNSLEAHAFLQLLATFSIVSDFDAEELKKLVPLVSRRRQAAELCRSLGLSDKMPGVIEVLIHSGRQIDAINLAFQFGLTEQFPPVPLLQNYLKEAKKVSSPAKPGNTSPPSPNAQNNEVNERELSALKAVIKCVEEHKLEEQFPVDSLAKRVLQLEKAKADKKRATEVPKPQSKRPRATNTGYGPRFTNIAPNNSPYAARPTDRYPPQYVFDNRPYVYTPGPTDNHCAPVLGAPAYAFPPPAHANYYANGYQYQAPAYLH*

Click here to download the sequence:
Link to NCBI Protein BLAST