Transcript Information: S_Transcript_6516.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value2E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.271145734862
Replicate 224.488938237379
Replicate 326.269807926641
Condition 2: 8 Hour
Replicate 141.075193377158
Replicate 237.978327244072
Replicate 337.61404723422
Condition 3: 24 Hour
Replicate 120.643790240252
Replicate 221.028278782178
Replicate 325.265381251173


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6516.p1 GENE.S_Transcript_6516~~S_Transcript_6516.p1 ORF type:complete len:582 (+),score=143.94,Frigida|PF07899.7|7.8e+02,Frigida|PF07899.7|1.1e-108 S_Transcript_6516:103-1848(+)
ATGGAAGACACTCAGTCTGTTTCTGTACTCATAGACGCTGCAACATCGAAAATACAACAACTTCAAAAGGCATTTACTGAGCTTGAAAGTCACCGAGCTGTTACCCTAAATCTGAAATGGAAAGAGCTGGAAGCTCATTTCCATGGGCTAGAGAAGTCACTGAAGAGGCGCTTTCATGAGTTGGAAGATCAGGAGAAGGAATATGAAAGCAAGACCATGGAGGCACAAGATATAATTGAGAAGCATAAAGCCGCTGTTGTGGCTAAGGAGCAAGCTTCGCTGGAAAAGCTTCAAGAGAAGAGGGATGCTGCCATGTTAGCTATTGCAACTGCTAGAGAGAAGCAACGGAGGGTATCAAGCGAATTTTATACTGTAGTCACCAGTGTGGGTCAAGTTGGAACAGCCATGGAAGAGACTCCTACCAATTCTATGATATCTGATATTACTTCAGAGGACATAAGTGGCTCGGTCGAATATGGAAGTCCTGAAGTGCAGTCAGCTGAAAGTGGAAATGGTGAGGCGATGTCTTATCCTGAGCTTGTCAAACTATGTGAAGAGATGGATGCAGAGGGTCTTCACAACTTCATATCTGACAACCGCAAGAACCTTGCATCAATGAGGGAGGAAATACCACAGGCACTGAAGGCTGCTGCTGACCCTGCTCATCTGGTTTTGGATTCACTGACCGACTTTTACAGGGGTGATGTCACAAACTTGGATGCAAAGAAGGATTCCAGTCTTTTGGGTCTGCGTCGAACCTGCATCATGTTGATGGAGTGCCTTAGCAGTTTGTTTATAAGCTTGGATGCAGTCTCTGTTTCTAATATAATATCTGAAGTTGTCAAGGTGCGAGCAAAATCTATTGCTGAAGCATGGAAGCCAAAGCTCAATGAACTTGACATGGAAGCTGGCAATGGAAACTCCTTGGAGGCTCATGCATTCTTACAGCTTCTGGCGACTTTTTCAATCGTATCTGATTTTGATGCAGAGGAACTAAAGAAACTGGTGCCTTTGGTGTCACGCCGTCGCCAGGCTGCTGAACTCTGCCGTTCTCTCGGGTTATCTGACAAAATGCCAGGTGTAATTGAAGTACTGATACACAGTGGCAGACAAATCGATGCTATCAATCTGGCTTTCCAGTTTGGACTGACTGAGCAGTTTCCACCTGTGCCTCTGCTGCAAAACTATCTGAAGGAAGCAAAGAAAGTTTCTTCACCAGCTAAGCCCGGGAACACATCACCACCATCTCCCAATGCTCAGAATAATGAGGTAAATGAACGAGAGCTCAGTGCACTGAAGGCTGTGATAAAATGTGTTGAAGAGCACAAGCTTGAGGAGCAGTTCCCTGTGGATTCCCTGGCAAAATGTGTCATCCAGCTCGAGAAGGCCAAAGCAGACAAGAATCAGGCAACGGAAGTACCTAAGCCTCAATCCAAGAGGCCCCGAGCCACCAACACAGGTTACAGGCCTCGCATCACTAACATTGCTCCCACCAACTCCCCCTATGCTGCTAGGCCAACGGATAGGTACCCTCCTCAGTACGTGTTTGACAACAGATCTTATGTTTACAGCTCAGGACCTACTGACAATCACTGTGCTCCTGTCTTGGGTGCCCCTACATATGCCTTCCCCCCTCCCCCTTCCTGGGCATGCCAATTCCTATGCGAATGGCTACCAGTACCAGGCCCCAGCCTACCTTCACTAGTTAGTACTGATATGTTAATTGGTCACTTTCTAACCGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6516.p1 GENE.S_Transcript_6516~~S_Transcript_6516.p1 ORF type:complete len:582 (+),score=143.94,Frigida|PF07899.7|7.8e+02,Frigida|PF07899.7|1.1e-108 S_Transcript_6516:103-1848(+)
MEDTQSVSVLIDAATSKIQQLQKAFTELESHRAVTLNLKWKELEAHFHGLEKSLKRRFHELEDQEKEYESKTMEAQDIIEKHKAAVVAKEQASLEKLQEKRDAAMLAIATAREKQRRVSSEFYTVVTSVGQVGTAMEETPTNSMISDITSEDISGSVEYGSPEVQSAESGNGEAMSYPELVKLCEEMDAEGLHNFISDNRKNLASMREEIPQALKAAADPAHLVLDSLTDFYRGDVTNLDAKKDSSLLGLRRTCIMLMECLSSLFISLDAVSVSNIISEVVKVRAKSIAEAWKPKLNELDMEAGNGNSLEAHAFLQLLATFSIVSDFDAEELKKLVPLVSRRRQAAELCRSLGLSDKMPGVIEVLIHSGRQIDAINLAFQFGLTEQFPPVPLLQNYLKEAKKVSSPAKPGNTSPPSPNAQNNEVNERELSALKAVIKCVEEHKLEEQFPVDSLAKCVIQLEKAKADKNQATEVPKPQSKRPRATNTGYRPRITNIAPTNSPYAARPTDRYPPQYVFDNRSYVYSSGPTDNHCAPVLGAPTYAFPPPPSWACQFLCEWLPVPGPSLPSLVSTDMLIGHFLTA*

Click here to download the sequence:
Link to NCBI Protein BLAST