Transcript Information: S_Transcript_65204.p1


Annotated TAIR IDAT2G13600.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5671493-5673586 | Forward length=697
E-Value3E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2809154322664
Replicate 27.467005428074
Replicate 38.851643379747
Condition 2: 8 Hour
Replicate 110.687843024507
Replicate 211.370597598729
Replicate 310.657923802491
Condition 3: 24 Hour
Replicate 18.1403103573441
Replicate 26.8686315744355
Replicate 37.2870293387423


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65204.p1 GENE.S_Transcript_65204~~S_Transcript_65204.p1 ORF type:complete len:848 (+),score=136.53,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|4e-07,PPR|PF01535.16|0.00096,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|0.59,PPR|PF01535.16|0.46,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.02,PPR|PF01535.16|3.4e-05,PPR|PF01535.16|1.8,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|6e-06,PPR|PF01535.16|0.0024,PPR|PF01535.16|3.3,PPR|PF01535.16|2,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|0.62,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.94,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|38,PPR_2|PF13041.2|0.00053,PPR_2|PF13041.2|7.6e-10,PPR_2|PF13041.2|16,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|1e+02,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|42,PPR_1|PF12854.3|70,PPR_1|PF12854.3|80,PPR_1|PF12854.3|6,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|0.00061,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|75,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|1.6,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|0.00069,PPR_3|PF13812.2|39,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.0063,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|8.4e+02 S_Transcript_65204:378-2921(+)
ATGGTACTCAAGCTCTTGTGGCAGCGATGGAGCTTTCTCTCAGTTCCCTCTCATCGTCATTTTTGTTTCCTCACCCACCAAGAAGACCTTTTCTCAAAACATGCCTTTTATCGCGATCTATCATCTCAACAATCTATTTATACAGACAAATCCCAGAAATTCTACGAGGCTATGAAAGAGTGTGTATCTCTAGCTTCTGTGCCCATTGCCTGCAAACTCCATGGTCAGCTTATTTCAACTGGCTTAGGCTCTTCAGTATACCTTCAAAACCATCTCTTACACATGTACTTTAGTTGCCACTTAGTAGGGAATGCTGGTCGTGTGTTCTCTGAAATCGAGTTCCCTAATGTTTTTAGCTGGAACACAATGATCAATGGGTTGGCAAACTGTGGACAGATTTGTGAAGCAGCTAAGCTGTTTGAGAAAATGCCCCAGAGAGATGTAGTATCATGGAATACAATGATGTCCAGCTATTTTAACAATGGGAGGCCTGGAGATAGTATAAGGGTTTTTATTTCTTTGTTGCGAGAGTGCTTCGTATCTCTTGTCCCTTCTTCTTTCTCAAGTGCGATGAAGGCTTGTGCTAGTATTTGTTGCCTTAGATTGGCAATTCAGTTGCATGGTTCAGCAGAGAGGCATGGGTTTTCCGATGATACTTCAGTTAAAGCTTCAATCATTGATATGTACGTCAAGTGCAATGCTGTCAGTTATGCCGAACAAGTTTTTCGTCGGATGAAGGATCCTAATTTGTTTTGCTGTAATAGTATGATCTATGGTTACTCGATACTATATGGTGTTGAAGCTGCTGTGAATTTGTTTTATCAGATGCCTGAACATGATGATGTTTCATGGAGTACTATGATATCCTTATCTTCCCAACATGGTTATGGATCTAAAGCCCTTAATATGTTTGTTGAGATGTGGAACCAAGGGTTCATGCCAAATTCCATGACATATGCTACTGTGATCAGAGCATGCACAGGCCTGTATGGTCTGTATTGGGGTTGCCATTTGCATGCCAGAATTCTCAGAATGGAATCAAGCCTTGATGCTTACACTGGGAATGCTTTGATTGACATGTACGCCAAAGGTGGGTTCTTGGACTCTGCAAGACGAGTATTTGATTGCTTAACAGAACTCAATGTAGTCTCGTGGACTTCCTTAATTGCAGGTAATGTGCAGTTTGGCCGCATAGAGCAAGCTTTAGCACTGTTCAATCAAATGAGGAAGGTTCCTCTGTTTCCTGATGCAATCACTGTTTCTACTGTACTCAGTGTATGTACATCTTATAAGGATATCACTTTGGGAATGCAGCTCCATGGATACACTGTCAAAACTGGCGCTGATTCTTTAACAACTGTGGGAAATGCCTTGATTACAATGTATGGCAAGGTTGGTAATGTTTGTAGTGCCGAAACCCAATTCGATTTGATGCCCATCAAAGATATAATATCCTGGACAGCAGTGATCACAGCATTTTCCCAGAACAGTGATGTTGAAAAGGCGCGGGAATACTTTGATAAAATGCCTCAGCGAAATGTTGTCACTTGGAACTCCATGATGGCAGCGTATGTACAAAATGGTTTTCGGGAAGAAGGTCTCAAGTTGCATCGCCTGATGTTAACACATGGGATTGAGCCAGATTCAATTACTTTTGTGACTTCCATCAGTGCCTGTGCTGATTCTGCATTATTAGAAATGGGCAGCCAAATTGTGGCTCAAGCTGTAAAGTCTGGTTTTGCTTCATATGTTTCGGTTGCAAACAGTGCTGTTACAATGTATTCCAAATGTGGATTGGTTACTGAGGCAGAGAAAGTTTTCAATTCTATAACCACAAAAAATGTGATATCTTGGAATTCAATGATGGCTGGATATGCTCAAAATGGTTTCGGCATGAAAGCGATTGAGATGTTTAAGACTATGTTGATGTTTAATTTTGCACCTGATGACTTCAGCTATATCTCACTCCTAATGGGTTGCAGCCATGCTGGACTTGTAGAGGAAGGATGCCGTTACTTCAACTCCATGAAAAATGATCATGGTATCTGCCCAACACGTGGACATTATGCTTGCATGGTCGACCTGCTTGGCCGAGCAGGGTTTATAGAGCAAGCCCTGGTTGTTATAGCAGAAATGCCTTTCCAAGCAACTGATGATGTTTGGGGAGCACTCCTTGCTGCTTGCCGTACTAATAAAAGCACTAAATTTGTAGAATTTGCTGCAAGACAGTTGCTGGAACTTGATGTTAAAGGATCAGGAAGTTATTCCCTCCTGGCTAATCTGTATTCTGAGTCTGGGAAATTAGGACATGTAACTGGTGTCAGAAAACTAATGAGAGATAAAGGAATCCAGAAAGTTACTGGCTGTAGCTGGATTGAAATTCATAACAGGGTGCACGTGTTTACTGCAGATGGCAGCAACAACCCTCAAATAATTGATGTTATTAAAGTGCTGGAAAGGCTATGCAAAATGGAAGACATGAACAGCGATGAGAAAGAGCAAAATTTGCTGGATCCTGGTGGTTGTGAAATGCTTGTGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65204.p1 GENE.S_Transcript_65204~~S_Transcript_65204.p1 ORF type:complete len:848 (+),score=136.53,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|4e-07,PPR|PF01535.16|0.00096,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|0.59,PPR|PF01535.16|0.46,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.02,PPR|PF01535.16|3.4e-05,PPR|PF01535.16|1.8,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|6e-06,PPR|PF01535.16|0.0024,PPR|PF01535.16|3.3,PPR|PF01535.16|2,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|0.62,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.94,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|38,PPR_2|PF13041.2|0.00053,PPR_2|PF13041.2|7.6e-10,PPR_2|PF13041.2|16,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|1e+02,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|42,PPR_1|PF12854.3|70,PPR_1|PF12854.3|80,PPR_1|PF12854.3|6,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|0.00061,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|75,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|1.6,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|0.00069,PPR_3|PF13812.2|39,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.0063,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|8.4e+02 S_Transcript_65204:378-2921(+)
MVLKLLWQRWSFLSVPSHRHFCFLTHQEDLFSKHAFYRDLSSQQSIYTDKSQKFYEAMKECVSLASVPIACKLHGQLISTGLGSSVYLQNHLLHMYFSCHLVGNAGRVFSEIEFPNVFSWNTMINGLANCGQICEAAKLFEKMPQRDVVSWNTMMSSYFNNGRPGDSIRVFISLLRECFVSLVPSSFSSAMKACASICCLRLAIQLHGSAERHGFSDDTSVKASIIDMYVKCNAVSYAEQVFRRMKDPNLFCCNSMIYGYSILYGVEAAVNLFYQMPEHDDVSWSTMISLSSQHGYGSKALNMFVEMWNQGFMPNSMTYATVIRACTGLYGLYWGCHLHARILRMESSLDAYTGNALIDMYAKGGFLDSARRVFDCLTELNVVSWTSLIAGNVQFGRIEQALALFNQMRKVPLFPDAITVSTVLSVCTSYKDITLGMQLHGYTVKTGADSLTTVGNALITMYGKVGNVCSAETQFDLMPIKDIISWTAVITAFSQNSDVEKAREYFDKMPQRNVVTWNSMMAAYVQNGFREEGLKLHRLMLTHGIEPDSITFVTSISACADSALLEMGSQIVAQAVKSGFASYVSVANSAVTMYSKCGLVTEAEKVFNSITTKNVISWNSMMAGYAQNGFGMKAIEMFKTMLMFNFAPDDFSYISLLMGCSHAGLVEEGCRYFNSMKNDHGICPTRGHYACMVDLLGRAGFIEQALVVIAEMPFQATDDVWGALLAACRTNKSTKFVEFAARQLLELDVKGSGSYSLLANLYSESGKLGHVTGVRKLMRDKGIQKVTGCSWIEIHNRVHVFTADGSNNPQIIDVIKVLERLCKMEDMNSDEKEQNLLDPGGCEMLVF*

Click here to download the sequence:
Link to NCBI Protein BLAST