Transcript Information: S_Transcript_65310.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value4E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.402036015781
Replicate 210.340766002422
Replicate 310.953300110565
Condition 2: 8 Hour
Replicate 122.119228873778
Replicate 219.002822364032
Replicate 317.492700657218
Condition 3: 24 Hour
Replicate 112.308538413482
Replicate 210.814204508511
Replicate 311.010638674315


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65310.p1 GENE.S_Transcript_65310~~S_Transcript_65310.p1 ORF type:5prime_partial len:591 (+),score=155.90,Frigida|PF07899.7|5.2e+03,Frigida|PF07899.7|2.5e-92 S_Transcript_65310:2-1774(+)
TCGTTCTCTCTCTCTCCCTCCAACAAAAATCTTCAATCTCCGGTCTCAATCTCTGCTTGCCATCGCCGGAATCTTCCATCTCCGGAAAGGTGTGAAACCATCCAGTACATCGAAATGCCTGAAGCAGACGAAGTTGTTGACATGAATTTGACTTCATCTTTAGAGCGTACAACATCTCTTATAGAAAATCTGGGGAAGACATTTGCAGAGCTCGAAGCTCAAGAGGATTCTTGTATTGATAACATTCCATGGAAAGATGTCGAAGGACATTTTCGTTATTTGGAGTCTGTGATGAAGAAGAAACTTGAAGAACTTGATGCCAAGGAAAAGGAAGTTACAGAGAAAGAATTGCTGCTTGCTGAGAGAGAGGCTGTAGTTACTGCTAAGGAGCAAGATTTACTAGATAGAATGCAGGAACTAAAAGATGCTGCTGTGTCAGCCATCATGGAGGCAAGGGCTGTTTACAAGGTAAGCTGCTTTGATAATTATGAAACTGCCGAAGAGAAACATAGGGCAGAAGTTGTGGCTGCAGAGCTGAGACAATTTTGTGAACGGATGGATTCAAAGGGGCTTCTGAACTTTGTCATGGAGAACCTAAATGACCTTTCTGCTGTTTGTAGGAAACAGCTTTCTTTTGTACTTGTTAGTGCAACTGAACCAGCCCGGTTGGTGCTGGATGCACTAGAGGGATTCTTCCCTCCTAATGAATTGGCCCCAAATGGGGATGATAGGGACAATCCCCTTCATGGCATGCGTCAGTCTTGTCTTTTACTTATGGAAGCCTTGTGTGCCTTCCTGGCCAGGGCTGGTCCTTCTGCAGATAATTTTCTAAACCCTGAAATCAAGCAGATTGCCAAGGCAATTGCTGGCGAGTGGAAGCCTAAGTTGGCTCTGGAAAGCACTAGTGCTGCCAATGGAAAATCATTGGAGGCAAGGGCACTCTTGCGGCTTCTTGTAACCTTTAGGATTGCCTCAGAGTTTGATGAAGAAGAACTCTGCAAGTACATTCTTGCAACTGCTCATCACAGGCAGGCAACTGAGCTCTGCCGTCCTCTTGAGTTGTCACAAAAGATACCAGGTATTGTTAAGACATTGATTGGAAATGGGAGAAACATTGAAGCAGTCAATTTTATTCTTTCATTCCAGCTCTCTGAGGCCTTTCCTCCGGTTCCCCTTTTGAAGGCATACCTGAAAGAGCTAAGGAGAAACTTGCAAGGGAATGGTGATGCTGAAACACAGAACAATTACAATGCACAAGAACTTGCTGCCATAAAGTCCGTGATGCGGTGCGTTAAAGAATACAAACTCGAAGCTGACTACCCACTCGATCAGCTTAGGAAAAGGTTTGTCCAGCTGCAGAATTCAGTTTCAGATAGAAAGAGGAAAAGAGAAAAAGGGAAACGTCGGCAAAATGGGTCACAGGATGTTAAAGAGTCTCATGAAATGAAAGTTCGTGTGTCTGAAAGTACCAGGCACAATCCACCACCCTTCTTGGGGGAGGGGGGAGCATATACTGGACTAACAGAGAGACACTCTTCTGCCTTTCCAAGTGCATACAACTATCCTCTATCTAGCCAAATTCCATATGCTGCTCAGGCAAATGACAGAGGTACATTTGGTTATACACTTTCTAGCCAATCTATATATGCAGCTCCGGTAAATGATGAAAATCCATATCACTATTCTCAAGTTGACAGGGCTTCTGTGCCTTATTCTACCACAGCCGCTAGTTATAGCGCTTACACACAGCCTCCACAACCACCTTATATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65310.p1 GENE.S_Transcript_65310~~S_Transcript_65310.p1 ORF type:5prime_partial len:591 (+),score=155.90,Frigida|PF07899.7|5.2e+03,Frigida|PF07899.7|2.5e-92 S_Transcript_65310:2-1774(+)
SFSLSPSNKNLQSPVSISACHRRNLPSPERCETIQYIEMPEADEVVDMNLTSSLERTTSLIENLGKTFAELEAQEDSCIDNIPWKDVEGHFRYLESVMKKKLEELDAKEKEVTEKELLLAEREAVVTAKEQDLLDRMQELKDAAVSAIMEARAVYKVSCFDNYETAEEKHRAEVVAAELRQFCERMDSKGLLNFVMENLNDLSAVCRKQLSFVLVSATEPARLVLDALEGFFPPNELAPNGDDRDNPLHGMRQSCLLLMEALCAFLARAGPSADNFLNPEIKQIAKAIAGEWKPKLALESTSAANGKSLEARALLRLLVTFRIASEFDEEELCKYILATAHHRQATELCRPLELSQKIPGIVKTLIGNGRNIEAVNFILSFQLSEAFPPVPLLKAYLKELRRNLQGNGDAETQNNYNAQELAAIKSVMRCVKEYKLEADYPLDQLRKRFVQLQNSVSDRKRKREKGKRRQNGSQDVKESHEMKVRVSESTRHNPPPFLGEGGAYTGLTERHSSAFPSAYNYPLSSQIPYAAQANDRGTFGYTLSSQSIYAAPVNDENPYHYSQVDRASVPYSTTAASYSAYTQPPQPPYM*

Click here to download the sequence:
Link to NCBI Protein BLAST