Transcript Information: S_Transcript_65313.p2


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value4E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5700367510608
Replicate 23.2287009108558
Replicate 33.5236121785741
Condition 2: 8 Hour
Replicate 15.7214461826454
Replicate 24.6380661814067
Replicate 33.9858902025575
Condition 3: 24 Hour
Replicate 13.4632132363137
Replicate 22.3953621991261
Replicate 34.613788610692


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65313.p2 GENE.S_Transcript_65313~~S_Transcript_65313.p2 ORF type:3prime_partial len:246 (+),score=43.63,Frigida|PF07899.7|2.8e-32 S_Transcript_65313:1232-1966(+)
ATGTGTACAGAATGGTACTTCATTTTTCCCCTTTGTTTGGCAGGTATTGTTAAGACATTGATTGGAAATGGGAGAAACATTGAAGCAGTCAATTTTATTCTTTCATTCCAGCTCTCTGAGGCCTTTCCTCCGGTTCCCCTTTTGAAGGCATACCTGAAAGAGCTAAGGAGAAACTTGCAAGGGAATGGTGATGCTGAAACACAGAACAATTACAATGCACAAGAACTTGCTGCCATAAAGTCCGTGATGCGGTGCGTTAAAGAATACAAACTCGAAGCTGACTACCCACTCGATCAGCTTAGGAAAAGGTTTGTCCAGCTGCAGAATTCAGTTTCAGATAGAAAGAGGAAAAGAGAAAAAGGGAAACATCGGCAAAATGAGTCACGAGATGTTAAAGAGTCTCATGAAACCAAATTTCGTGTGTCTGAAAGTACCAGGCACAATCCACCACCCTTCTTGGGGGAGGGGGGAGCATATACTGGACTAACAGAGAGACACTCTTCTGCCTTTCCAAGTGCATACAACTATCCTCTATCTAGCCAAATTCCATATGCTGCTCAGGCAAATGACAGAGGTACATTTGGTTATACACTTTCTAGCCAATCTATATATGCAGCTCCGGTAAATGATGAAAATCCATATCACTATTCTCAAGTTGACAGGGCTTCTGTGCCTTATTCTACCACAGCCGCTAGTTATAGCGCTTACACACAGCCTCCACAACCACCTTATATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65313.p2 GENE.S_Transcript_65313~~S_Transcript_65313.p2 ORF type:3prime_partial len:246 (+),score=43.63,Frigida|PF07899.7|2.8e-32 S_Transcript_65313:1232-1966(+)
MCTEWYFIFPLCLAGIVKTLIGNGRNIEAVNFILSFQLSEAFPPVPLLKAYLKELRRNLQGNGDAETQNNYNAQELAAIKSVMRCVKEYKLEADYPLDQLRKRFVQLQNSVSDRKRKREKGKHRQNESRDVKESHETKFRVSESTRHNPPPFLGEGGAYTGLTERHSSAFPSAYNYPLSSQIPYAAQANDRGTFGYTLSSQSIYAAPVNDENPYHYSQVDRASVPYSTTAASYSAYTQPPQPPYM

Click here to download the sequence:
Link to NCBI Protein BLAST