Transcript Information: S_Transcript_65333.p1


Annotated TAIR IDAT1G47128.1
Annotated Gene NameGranulin repeat cysteine protease family protein
Annotated Gene Symbol(s)RD21, RD21A
Annotation TypeOrtholog
Chromosome Positionchr1:17283139-17285609 | Reverse length=462
E-Value5.1E-233
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1131.81929122447
Replicate 2129.65409522948
Replicate 3128.35359516906
Condition 2: 8 Hour
Replicate 1270.24260580605
Replicate 2264.1782126606
Replicate 3292.16317078998
Condition 3: 24 Hour
Replicate 1138.2269861724
Replicate 2145.72348634834
Replicate 3132.54989293752


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65333.p1 GENE.S_Transcript_65333~~S_Transcript_65333.p1 ORF type:complete len:470 (+),score=87.19,Peptidase_C1|PF00112.19|5e-86,Inhibitor_I29|PF08246.8|8.8e-18,Granulin|PF00396.14|4e+02,Granulin|PF00396.14|3.5e-10 S_Transcript_65333:138-1547(+)
ATGGCGTCATCATCAATGTCTTCCAGGGTTTACACCCTCATCCTCCTTCTCTCCCTCCTCTCTCTCTCCTCAGCCATGGACATGTCCATCATAACCTACGACCAAACCCACAACATCCCCACAACCACATCGTCTCGCTCCGAAGCCGAGATGATGAAGATGTACGAAACATGGCTCGTCAAACACCGTAAAAACTACAACGCTTTGGGGGAGAAAGAGAGGAGGTTCGAAATCTTTAAGGATAACTTGAGGTTTATTGATCAGCACAATTCTGATGATTCCAAAACCTTCGAGTTGGGCCTTAACAAGTTCGCTGATTTAACAAACGACGAGTATCGGTCTAAATATCTGGGTGCTAAGAAAAAGCCTTCTTCTTTACAGAAGGTTAATAGCGATCGGTATTTGTTTAAGGCTGGTGATGAGAAGGAGTTGCCGAAATCTGTTGACTGGAGAGATCATGGCGCTGTTTCTCATGTCAAGGACCAAGGCCAATGTGGGAGCTGTTGGGCATTCTCCACAATTGCTGCTGTGGAAGGAATTAACAAAATTGTTACCGGCGAGCTGATATCATTGTCTGAGCAAGAGCTCGTCGATTGTGATACCGGCTACAATTCTGGATGCGATGGTGGTCTTATGGACTACGCTTTCCAGTTCATCATCAACAATGGTGGAATTGACACTGATAAGGATTATCCTTACAAAGGCAAGGATGATACCTGTGACCAGTATCGGAAGAATGCCAAGGTTGTTACAATTGATGGTTATGAAGATGTTCCAGTCAACGATGAGAAGGCCATGCAGAAGGCTGTTGCTAGCCAGCCAGTGAGTGTTGCAATCGAAGCTGGTGGTCGTGCCTTTCAGCTTTACCAATCCGGTGTATATACCGGCCACTGTGGAACAGACCTTGATCATGGTGTGGCCGCTGTTGGGTATGGCACATCTGAGGATGGTGTTGACTACTGGATTGTGAGGAATTCGTGGGGACCTGACTGGGGAGAGAACGGGTACATAAGGATGGAGAGAAACTTGAACAACACCGAAACTGGAAAATGTGGTATTGCAATGCAGGCATCATACCCAGTGAAGACGAGCCAGAACCCGCCAAACCCTGGTCCCTCTCCTCCATCTCCCCCACCAGCACCCGTTGTTACTTGTGATAAGTACTACTCATGCCCAGGTCAGACCACCTGCTGTTGCACCTTCCAGTGGGGTCGATACTGCTTTGACTGGGGTTGCTGCCCAATGGAGTCTGCTGTCTGTTGTGACGATCACTCCAGCTGCTGCCCTCATAAGTATCCTGTCTGCAACACCGTAGAAGGCACTTGCAATGCGGGAAAGAACAACCCCTTCAGTGTTAAAGCAATGAAGCGATCTCAAGCGAAATTCCATCCACATTTCTTGTTTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65333.p1 GENE.S_Transcript_65333~~S_Transcript_65333.p1 ORF type:complete len:470 (+),score=87.19,Peptidase_C1|PF00112.19|5e-86,Inhibitor_I29|PF08246.8|8.8e-18,Granulin|PF00396.14|4e+02,Granulin|PF00396.14|3.5e-10 S_Transcript_65333:138-1547(+)
MASSSMSSRVYTLILLLSLLSLSSAMDMSIITYDQTHNIPTTTSSRSEAEMMKMYETWLVKHRKNYNALGEKERRFEIFKDNLRFIDQHNSDDSKTFELGLNKFADLTNDEYRSKYLGAKKKPSSLQKVNSDRYLFKAGDEKELPKSVDWRDHGAVSHVKDQGQCGSCWAFSTIAAVEGINKIVTGELISLSEQELVDCDTGYNSGCDGGLMDYAFQFIINNGGIDTDKDYPYKGKDDTCDQYRKNAKVVTIDGYEDVPVNDEKAMQKAVASQPVSVAIEAGGRAFQLYQSGVYTGHCGTDLDHGVAAVGYGTSEDGVDYWIVRNSWGPDWGENGYIRMERNLNNTETGKCGIAMQASYPVKTSQNPPNPGPSPPSPPPAPVVTCDKYYSCPGQTTCCCTFQWGRYCFDWGCCPMESAVCCDDHSSCCPHKYPVCNTVEGTCNAGKNNPFSVKAMKRSQAKFHPHFLFA*

Click here to download the sequence:
Link to NCBI Protein BLAST