Transcript Information: S_Transcript_65385.p1


Annotated TAIR IDAT5G20170.1
Annotated Gene NameRNA polymerase II transcription mediators
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6807554-6810729 | Reverse length=653
E-Value2E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1488758761326
Replicate 21.9185034397839
Replicate 32.7492277391703
Condition 2: 8 Hour
Replicate 13.5763076929353
Replicate 24.029711866783
Replicate 33.1775176554009
Condition 3: 24 Hour
Replicate 13.7991101722773
Replicate 22.6042267960399
Replicate 34.4647718356882


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65385.p1 GENE.S_Transcript_65385~~S_Transcript_65385.p1 ORF type:complete len:322 (+),score=55.38 S_Transcript_65385:209-1174(+)
ATGGCGAATAACGACGAAGACATGGAAATCTCTCTCGATAAACTCCCTATCAAACGCCTTGACCACATCGAAGAAGCCGGCATCGAACACTTTCCTCCGGAGATCGGATACGAAGAGAAAACGGTGAATTTGATACGAAGAATCGATTTCGCATGGGCGGTGGATAGAGACACGAAGAAGCAGAAAAAATCGAAGGAAGCTTCAGCGCCGTCCACGTGGCAAGGCTTGGTGGAGAATTTGCAGTTAGCTCATCAGGAGCTTTCTGTTATTATTGATCTCATCAACACTGTTGAAGCAAATGATGCAGTTGCTGTGGCTGGTATGAATAGGCCTAAGCCTTTGCCTAATGAAGTCCTATCAGACCTTTCTGTGTCTACTGCAACTAAGCTACAATGTTATCGGAATCTCAGTAAGTATTTTAAGCAGTCTGCCAAAGCTCTGGAACATCAAATTGCCAGGGAAGCGAGATTCTACGGAGCTCTCATACGACTGCAGCAGAACTGGAAAGTCAAACGACATCGCTTGGCAGCCAATGCTCCTGGCAGTGAAGGCTTCTTGATTGATCTTTCTGACAATTTAGCGCATGATCAGTCGGCAGTAACTCGTCCTCCAGCTTTTTCACTGGTTCGTGTGGAGCATGATTCTTCTGGAATGTTGGCTGTGAACATTCCTAAAAAATCATGCCATTCTCTCCATTTTGGTTTTCTTGAGGCTGATTTGGATGATAGATCAGAACGTGGTAATCTGACTCTCCACACAGCTGAGCGGCCTCAAAAAGCAATGAAAAAGGATGCACTTAGTGATGATGACTGTATCCGAGAAACACATACCGTCCTCCGTGATGCTCACAGAGCAATATTTTATGAGCAAGTAAATATGTTCCTTTTGGCTCTTTGTTCTCTCTCTATCAAAAAAAAAGAAAAAAAAAGTTGTGAACTGTTTTTGTTATGGCCACTTGAGGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65385.p1 GENE.S_Transcript_65385~~S_Transcript_65385.p1 ORF type:complete len:322 (+),score=55.38 S_Transcript_65385:209-1174(+)
MANNDEDMEISLDKLPIKRLDHIEEAGIEHFPPEIGYEEKTVNLIRRIDFAWAVDRDTKKQKKSKEASAPSTWQGLVENLQLAHQELSVIIDLINTVEANDAVAVAGMNRPKPLPNEVLSDLSVSTATKLQCYRNLSKYFKQSAKALEHQIAREARFYGALIRLQQNWKVKRHRLAANAPGSEGFLIDLSDNLAHDQSAVTRPPAFSLVRVEHDSSGMLAVNIPKKSCHSLHFGFLEADLDDRSERGNLTLHTAERPQKAMKKDALSDDDCIRETHTVLRDAHRAIFYEQVNMFLLALCSLSIKKKEKKSCELFLLWPLEG*

Click here to download the sequence:
Link to NCBI Protein BLAST