Transcript Information: S_Transcript_65386.p1


Annotated TAIR IDAT5G20170.1
Annotated Gene NameRNA polymerase II transcription mediators
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6807554-6810729 | Reverse length=653
E-Value4.3E-223
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4119150709785
Replicate 210.964130176448
Replicate 38.6590895026661
Condition 2: 8 Hour
Replicate 114.921271578604
Replicate 215.551163078834
Replicate 315.499480651793
Condition 3: 24 Hour
Replicate 19.5904366544072
Replicate 210.364547976988
Replicate 310.26567965879


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65386.p1 GENE.S_Transcript_65386~~S_Transcript_65386.p1 ORF type:complete len:656 (+),score=112.29 S_Transcript_65386:209-2176(+)
ATGGCGAATAACGACGAAGACATGGAAATCTCTCTCGATAAACTCCCTATCAAACGCCTTGACCACATCGAAGAAGCCGGCATCGAACACTTTCCTCCGGAGATCGGATACGAAGAGAAAACGGTGAATTTGATACGAAGAATCGATTTCGCATGGGCGGTGGATAGAGACACGAAGAAGCAGAAAAAATCGAAGGAAGCTTCAGCGCCGTCCACGTGGCAAGGCTTGGTGGAGAATTTGCAGTTAGCTCATCAGGAGCTTTCTGTTATTATTGATCTCATCAACACTGTTGAAGCAAATGATGCAGTTGCTGTGGCTGGTATGAATAGGCCTAAGCCTTTGCCTAATGAAGTCCTATCAGACCTTTCTGTGTCTACTGCAACTAAGCTACAATGTTATCGGAATCTCAGTAAGTATTTTAAGCAGTCTGCCAAAGCTCTGGAACATCAAATTGCCAGGGAAGCGAGATTCTACGGAGCTCTCATACGACTGCAGCAGAACTGGAAAGTCAAACGACATCGCTTGGCAGCCAATGCTCCTGGCAGTGAAGGCTTCTTGATTGATCTTTCTGACAATTTAGCGCATGATCAGTCGGCAGTAACTCGTCCTCCAGCTTTTTCACTGGTTCGTGTGGAGCATGATTCTTCTGGAATGTTGGCTGTGAACATTCCTAAAAAATCATGCCATTCTCTCCATTTTGGTTTTCTTGAGGCTGATTTGGATGATAGATCAGAACGTGGTAATCTGACTCTCCACACAGCTGAGCGGCCTCAAAAAGCAATGAAAAAGGATGCACTTAGTGATGATGACTGTATCCGAGAAACACATACCGTCCTCCGTGATGCTCACAGAGCAATATTTTATGAGCAAGTATTTGAGTTAGTGAGCCGTGAATCATTCAATCCAAAGTTGGGGATTAATGTGTCTGGAATACGAGAAAATTATTTGGAACTAAAAATAAATCAAGGAGTATCTGTATTCATATCACTTGAGCCATCAGGACAAGATTATATCGCTGATAGCAAAGCCACCCAGAATGTAGAAGATATATCTGGTGGGGCTAGCTTAAGCTTGGTTGAAAGAAAGCTAGATACAAAGATGAAATCTGGACAACCTAATCACAGAACCTACGAGATATATCTGGAGCAGCTTTTCCATAATGAAATATTTGGAAAGATGAAGGACAGGCGAGCTTTATTTGGTAGAATTCAGTCTGCTCAGCAGGGGAAAGATGCTGTTGGTCTTGTGAATCATTTCTGCTTGTCTCTGGCTCACCGAATCTTCTCAAGCAAAGTTATGAAGGAGCTGGAAAACTTGGTTGTCAAGATTCCTTATCTCCAGTTAATAACACAACCTACATGGCATTCCCGAACTTCTTCATGGACATTATCTGTGAGAGTTCCTCAATCCATAGTAGATGCACGATCTCAGGCATGGAGATCAGATGAACATCAGATAGTAAGAACTTCCAAATCACTGTTCCAAACTAAGGTGGTGGCGAAAGACGATTCCATCAGCATTGAAGGGGGAGGTGCCCCTAGTGCTGTCACTTTGTTCAAGTCTAATCCAGAGTCTGCAGTCTCCAAGGATAGATTCAGTTGTGACCTGGTCGATCTTCCTATGGTACTTTTGTTGCAGGTAGCTAGTAAGATCATAAATTGGCTTCACGAAGAGGCATTGACGGTGGGTATAAAGACTAAGCCAGATTTTCTGTGTCTTTCTTTGGAGCTGGATCAAGGGGAAACACTTAGCCTTGTCGCACATGTTGACCCAAACGATGCTCTGGGTTGTATTTCTTGGTGGTTGATGATAGAGGACGGAATTACCAAGGAACGCAAACTTCAGGCAGATCTCGCTGATGATGACGAGTCTGGTAGTAGGCGGTTTTTGGGTTATTTATCGTTGGACGAGCTGTACTCAACCATGATGGACCTTGCCAGTTTGTCCACCGGCAGCGTTAATCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65386.p1 GENE.S_Transcript_65386~~S_Transcript_65386.p1 ORF type:complete len:656 (+),score=112.29 S_Transcript_65386:209-2176(+)
MANNDEDMEISLDKLPIKRLDHIEEAGIEHFPPEIGYEEKTVNLIRRIDFAWAVDRDTKKQKKSKEASAPSTWQGLVENLQLAHQELSVIIDLINTVEANDAVAVAGMNRPKPLPNEVLSDLSVSTATKLQCYRNLSKYFKQSAKALEHQIAREARFYGALIRLQQNWKVKRHRLAANAPGSEGFLIDLSDNLAHDQSAVTRPPAFSLVRVEHDSSGMLAVNIPKKSCHSLHFGFLEADLDDRSERGNLTLHTAERPQKAMKKDALSDDDCIRETHTVLRDAHRAIFYEQVFELVSRESFNPKLGINVSGIRENYLELKINQGVSVFISLEPSGQDYIADSKATQNVEDISGGASLSLVERKLDTKMKSGQPNHRTYEIYLEQLFHNEIFGKMKDRRALFGRIQSAQQGKDAVGLVNHFCLSLAHRIFSSKVMKELENLVVKIPYLQLITQPTWHSRTSSWTLSVRVPQSIVDARSQAWRSDEHQIVRTSKSLFQTKVVAKDDSISIEGGGAPSAVTLFKSNPESAVSKDRFSCDLVDLPMVLLLQVASKIINWLHEEALTVGIKTKPDFLCLSLELDQGETLSLVAHVDPNDALGCISWWLMIEDGITKERKLQADLADDDESGSRRFLGYLSLDELYSTMMDLASLSTGSVNL*

Click here to download the sequence:
Link to NCBI Protein BLAST