Transcript Information: S_Transcript_65399.p1


Annotated TAIR IDAT5G11700.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3762961-3771123 | Reverse length=1476
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.41095779073
Replicate 219.097507113903
Replicate 319.693476508506
Condition 2: 8 Hour
Replicate 129.871323551496
Replicate 228.302733297607
Replicate 325.862877981876
Condition 3: 24 Hour
Replicate 129.656247500794
Replicate 226.883584138651
Replicate 325.035444816422


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65399.p1 GENE.S_Transcript_65399~~S_Transcript_65399.p1 ORF type:complete len:811 (+),score=144.12 S_Transcript_65399:531-2963(+)
ATGGTTACCCTTAACACCATATCTCCCAAAACCTTCACTCAAATCTCCAAACTAAACAAACCCACTTCATCATTTCACAAACCCACCAAGCAAATCCAAATCCAATGGCCATCCCATTATTCACTGACAGCCAAACAGCGCATTATTTTTTCCGGGCAGGCAGTGAAGGACCTTGATGTGCTGCCCGTACGGAGCAGTGACTCTACTGACCATCCGGGCAACTCTATGCCAATGAATATGGAAAGGGAAAGGGAAGGAAGTGAAGGGGATTTGATTGGTGGGTTTGAAGGAAGATTGTCTTTAGAAGGTGTTGGTGGTGGTGTTAATACCACAACAACATCTTCAAGTGGTGGTGGTGGTGGTGGTGGAAGGATACACTTCCACTGGTCAGATATTCCTGTTGCAGATGAGTACCAGCCCATAGCTGAAGTGAAAGGGAGAATCCTTGTTAGGGGCGGATTGGGCAAAAGTCAGGGCCATCCTGGGGAAGAAGGAACTGTGACTGGGAAGGAATGTCCCAAAGGGCTACACGGGATCTTTTGTGAGGAATGTCCTGTTGGCACATTCAAAAATGTGTCTGGATCTGATGCTGCCTTGTGTCATAGTTGCCCAGCTAATGAACTTCCAGATCGTGGCATGTATATTTCTATTCGAGGTGGTGTTACTGAGACCCCTTGCCCTTACAAGTGTGTATCTGATATTTATCACATGCCACACTGTCGCACAACACTGGAAGAGTTAGTCTACACATTGGGCGGGCCATGGTGGTTTGGATTTTTTCTGTTGAGTCTCCTCACACTGTTAGCTGTAGTGCTCAGTGTTGCACGGATGAAATTTGCTTCTGGGGATGAACTTCAAGGCCTATTACACCCCCGGCGACGTGCATTGGATCATTCCTTCCCTTTCCTTGAGTCTTTGAATGAGGTTTTGGAGACAAATAGAAATGAAGAAGCACAGAGCCATGTGCATAGAATGTATTTCATGGGTCCAAATACTTTCAGTGAGCCATGGCATCTACCTCACTCTCCTTCTGATCAAGTAAAGGAGATAGTGTACGAGGATGCATTTATTCGTTTTGTTGATGAGATCAATGGTTTAGCTTCTTATCATTGGTGGGAAGGATCAGTGTACAGTATACTATCTGTTCTTGCATACCCACTAGCATGGTCATGGTTGCAGTGGCGGCGAAGAAAGAAGTTGCAGCGGTTGCGTGAGTTTGTCCGATCAGAATATGATCACTCCTGTTTGCGTTCTTGTCGATCCCGTGCTCTTTATGAAGGGCTCAAGCTATCTGCTACCACGGACTTGATGCTTGCATATATGGACTTTTACCTGGGTGGAGATGAAAAGAGATCTGACCTTCCTCCTCGTCTTAACCAGCGTCTCCCTATGACATTGGTATTTGGAGGTGATGGAAGCTACATGGCTCCATTCTCTCTTCATAATGATAATGTATTAACTAGCCTTATGAGTCAGTCTGTGCCACCAACAGTTTGGTATCGCTTTGTGGCTGGTTTAAATGCGCAATTGCGTTTGGTTCGTCGTGGACAACTTAAAATGACCTTTGAACCTGTTATTGCCTGGATTGAAACCTTTGTGAACCTTTCCCTGAGCAACCATGGCATGCAAGTTAATCTGGCTTTGTTTCAGCCAACTGCTTTTGGTTATTCTCAGTTTGGACTTGTGGTGCGGCAAGCTAGAGATGAGCAATCAACCAGACACGTTGTCAATGGATTCCCAGTTCCAAAACCACAATCACGGATTCATAAGGCTGATCAGCATGAGGATGCAAAAGAAAATGAAGACCATGCAAAAGAAGATGAACTAATTATGATGAATAGGAAAATATCTGGATGTATTCTTCAAGGAAAGAGTCTGTACATGCTCAATGATAGAAAGGATATTTGCTATCCCCTGAACTTCATACTGTGTAACACTAAGCCAGCTGGTCATCAGGATCTGATTGGTCTTGCCCTCTCAATGCTACTTCTTGGAGACTTTAGCTTAGTAGTCCTCACTTTGATCCAGCTATATTCTACCTCAATTTTGGACTTCTTTCTGGTTCTGTTTTTCCTTCCTCTTGGAGTATTACTTCCATTTCCTGCTGGAATAAATGCATTGTTCAGCAAAGGACCTAGAAAATCTGCAGGCCTTGCTCGAATACATGCTCTTTGGAATATCACTTCGTTGATCAATGTTATCATCGCGTTAATTTGTGGATTTGTTCATTACAAGACTCAACCAAGGAAAAATTCTTTATGCTTCCATGCTTGGAATTTTGGCAGGGAGGAAAGTGAATGGTGGTTGCTCCCTTTTGCTTTGATTCTATGCAAGCTTCTTCAGGCCCGACTAATTGATTATCATATAGCTAACCAAGAGATTCAGGATCCGACATTATATAGCAAGGACCCTGACATGTTCTGGCAGTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65399.p1 GENE.S_Transcript_65399~~S_Transcript_65399.p1 ORF type:complete len:811 (+),score=144.12 S_Transcript_65399:531-2963(+)
MVTLNTISPKTFTQISKLNKPTSSFHKPTKQIQIQWPSHYSLTAKQRIIFSGQAVKDLDVLPVRSSDSTDHPGNSMPMNMEREREGSEGDLIGGFEGRLSLEGVGGGVNTTTTSSSGGGGGGGRIHFHWSDIPVADEYQPIAEVKGRILVRGGLGKSQGHPGEEGTVTGKECPKGLHGIFCEECPVGTFKNVSGSDAALCHSCPANELPDRGMYISIRGGVTETPCPYKCVSDIYHMPHCRTTLEELVYTLGGPWWFGFFLLSLLTLLAVVLSVARMKFASGDELQGLLHPRRRALDHSFPFLESLNEVLETNRNEEAQSHVHRMYFMGPNTFSEPWHLPHSPSDQVKEIVYEDAFIRFVDEINGLASYHWWEGSVYSILSVLAYPLAWSWLQWRRRKKLQRLREFVRSEYDHSCLRSCRSRALYEGLKLSATTDLMLAYMDFYLGGDEKRSDLPPRLNQRLPMTLVFGGDGSYMAPFSLHNDNVLTSLMSQSVPPTVWYRFVAGLNAQLRLVRRGQLKMTFEPVIAWIETFVNLSLSNHGMQVNLALFQPTAFGYSQFGLVVRQARDEQSTRHVVNGFPVPKPQSRIHKADQHEDAKENEDHAKEDELIMMNRKISGCILQGKSLYMLNDRKDICYPLNFILCNTKPAGHQDLIGLALSMLLLGDFSLVVLTLIQLYSTSILDFFLVLFFLPLGVLLPFPAGINALFSKGPRKSAGLARIHALWNITSLINVIIALICGFVHYKTQPRKNSLCFHAWNFGREESEWWLLPFALILCKLLQARLIDYHIANQEIQDPTLYSKDPDMFWQS*

Click here to download the sequence:
Link to NCBI Protein BLAST