Transcript Information: S_Transcript_6540.p1


Annotated TAIR IDAT3G54820.1
Annotated Gene Nameplasma membrane intrinsic protein 2;5
Annotated Gene Symbol(s)PIP2D, PIP2;5
Annotation TypeOrtholog
Chromosome Positionchr3:20302117-20303738 | Forward length=286
E-Value1.1E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1181.10665775629
Replicate 2168.57499380525
Replicate 3147.30237261577
Condition 2: 8 Hour
Replicate 197.672134006609
Replicate 2102.85239504498
Replicate 3109.16297712854
Condition 3: 24 Hour
Replicate 1151.21198572061
Replicate 2173.16721832144
Replicate 3166.18160859128


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6540.p1 GENE.S_Transcript_6540~~S_Transcript_6540.p1 ORF type:5prime_partial len:231 (+),score=31.07,MIP|PF00230.16|1e-74 S_Transcript_6540:2-694(+)
ACTGTGATTGGTTACAAGAGCCAGGTTGACCCCGCTAAGAATGCTGATGCTTGCGGTGGGGTTGGTATTCTTGGTATTGCTTGGGCCTTTGGTGGCATGATTTTCATCCTTGTTTACTGCACTGCCGGAATTTCTGGTGGGCACATAAACCCAGCGGTGACATTCGGGCTATTCCTGGCTCGGAAGGTCTCACTAATTCGAGCACTGATGTACATGGTGGCACAGTGCCTTGGAGCCATTTGTGGAGTTGGGCTAGTGAAGGCCTTCCAAAAGTCTTACTATGTCAGGTATGGTGGAGGCGCAAACGAGCTATCAATCGGATATAGCACCGGCACTGGACTGGCGGCCGAGATCATTGGCACCTTCGTTCTCGTCTACACCGTGTTCTCTGCTACTGACCCCAAGAGAAGCGCTAGAGACTCCCATGTTCCTATATTGGCTCCACTTCCAATTGGGTTTGCGGTATTCATGGTTCACCTTGCCACAATCCCTATTACTGGTACTGGCATCAACCCAGCTCGAAGTCTTGGCGCGGCAGTCATCTACAACAACCAAAAGGCCTGGGATGATCATTGGATATTTTGGGTTGGACCCTTCATTGGAGCAGCAATTGCAGCATTCTACCACCAATTTATCCTTAGAGCTGGGGCTGTCAAGGCTTTGGGATCCTTCAGGAGCAGCTCCCAAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6540.p1 GENE.S_Transcript_6540~~S_Transcript_6540.p1 ORF type:5prime_partial len:231 (+),score=31.07,MIP|PF00230.16|1e-74 S_Transcript_6540:2-694(+)
TVIGYKSQVDPAKNADACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRALMYMVAQCLGAICGVGLVKAFQKSYYVRYGGGANELSIGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNQKAWDDHWIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSSSQV*

Click here to download the sequence:
Link to NCBI Protein BLAST