Transcript Information: S_Transcript_65473.p1


Annotated TAIR IDAT5G02710.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:612628-613480 | Forward length=176
E-Value1.4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0080682286053
Replicate 20.50142703539806
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 31.4533532457942
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.5286087518252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65473.p1 GENE.S_Transcript_65473~~S_Transcript_65473.p1 ORF type:5prime_partial len:132 (+),score=28.26,CxxCxxCC|PF03692.11|1.3e-06 S_Transcript_65473:2-397(+)
GTGGTGAAGATAGAGGAAGGAAAGCAAGGAAATGGGGGAGGGTTTGGACAGCAGAAGAAGAAGGAACCACTTTGGCAGTGTGTTAAGGGATGTGGGGCCTGCTGTAAGCTTGCCAAGGACCCCACTTTTGCTACTCCTGAAGAGATTTTTGATAACCCTTCTGATATTCAGCATTATAAAAGCTTAATAGGAGCAGATGGATGGTGCACAAACTATGATAAAAGCACTAGGACATGCTCTATCTACGATGATGTATTTCATATGGAATCAACAAGAAGAGATTCAACAAGGAGGCTTGCAGTTGCTGTAATGACACAATCAAAGCAATTTATGGACCTGATTCAGAAGAGCTGGAGACGTTCAACAAGGCAATTCGAAGTTGAACAATTCGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65473.p1 GENE.S_Transcript_65473~~S_Transcript_65473.p1 ORF type:5prime_partial len:132 (+),score=28.26,CxxCxxCC|PF03692.11|1.3e-06 S_Transcript_65473:2-397(+)
VVKIEEGKQGNGGGFGQQKKKEPLWQCVKGCGACCKLAKDPTFATPEEIFDNPSDIQHYKSLIGADGWCTNYDKSTRTCSIYDDVFHMESTRRDSTRRLAVAVMTQSKQFMDLIQKSWRRSTRQFEVEQFA*

Click here to download the sequence:
Link to NCBI Protein BLAST