Transcript Information: S_Transcript_65477.p1


Annotated TAIR IDAT5G02710.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:612628-613480 | Forward length=176
E-Value1.4E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.8644610893675
Replicate 31.5585410774874
Condition 2: 8 Hour
Replicate 112.464840819169
Replicate 210.555731400434
Replicate 310.808035405343
Condition 3: 24 Hour
Replicate 11.8460464921629
Replicate 23.9901076718921
Replicate 31.5985802791975


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65477.p1 GENE.S_Transcript_65477~~S_Transcript_65477.p1 ORF type:5prime_partial len:142 (+),score=28.35,CxxCxxCC|PF03692.11|7.7e-12 S_Transcript_65477:2-427(+)
GTGGTGAAGATAGAGGAAGGAAAGCAAGGAAATGGGGGAGGGTTTGGACAGCAGAAGAAGAAGGAACCACTTTGGCAGTGTGTTAAGGGATGTGGGGCCTGCTGTAAGCTTGCCAAGGACCCCACTTTTGCTACTCCTGAAGAGATTTTTGATAACCCTTCTGATATTCAGCATTATAAAAGCTTAATAGGAGCAGATGGATGGTGCACAAACTATGATAAAAGCACTAGGACATGCTCTATCTACGATGATCGGCCTTATTTTTGTCGCGTGGAGCCAGATGTATTTCATATGGAATCAACAAGAAGAGATTCAACAAGGAGGCTTGCAGTTGCTGTAATGACACAATCAAAGCAATTTATGGACCTGATTCAGAAGAGCTGGAGACGTTCAACAAGGCAATTCGAAGTTGAACAATTCGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65477.p1 GENE.S_Transcript_65477~~S_Transcript_65477.p1 ORF type:5prime_partial len:142 (+),score=28.35,CxxCxxCC|PF03692.11|7.7e-12 S_Transcript_65477:2-427(+)
VVKIEEGKQGNGGGFGQQKKKEPLWQCVKGCGACCKLAKDPTFATPEEIFDNPSDIQHYKSLIGADGWCTNYDKSTRTCSIYDDRPYFCRVEPDVFHMESTRRDSTRRLAVAVMTQSKQFMDLIQKSWRRSTRQFEVEQFA*

Click here to download the sequence:
Link to NCBI Protein BLAST