Transcript Information: S_Transcript_65480.p1


Annotated TAIR IDAT5G02710.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:612628-613480 | Forward length=176
E-Value9.4E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44602795366224
Replicate 20.24651161516776
Replicate 30.5151602257989
Condition 2: 8 Hour
Replicate 11.1913625875493
Replicate 22.9995774712483
Replicate 31.3099124226525
Condition 3: 24 Hour
Replicate 10.48815382101886
Replicate 20.75968083496136
Replicate 31.1272422080499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65480.p1 GENE.S_Transcript_65480~~S_Transcript_65480.p1 ORF type:complete len:179 (-),score=39.09,CxxCxxCC|PF03692.11|9.8e-11,CxxCxxCC|PF03692.11|1.3e+03 S_Transcript_65480:48-584(-)
ATGATGCTGCAAGCCATAGGCATAGGAGGAGCAAGTGGTAGTGTGACAAGCTTGTGTTCAGTGAGATGCAGGGCAAACTCAAAGCCAAGCCCAAAGGGGAAGGGCAAAACTGTCAAAGTGGTGAAGATAGAGGAAGGAAAGCAAGGAAATGGGGGAGGGTTTGGACAGCAGAAGAAGAAGGAACCACTTTGGCATTGTGTTAAGGGATGTGGGGCCTGCTGTAAGCTTGCCAAGGACCCCACTTTTGCTACTCCTGAAGAGATTTTTGATAACCCTTCTGATATTCAGCATTATAAAAGCTTAATAGGAGCAGATGGATGGTGCATACACTATGATAAAAGCACTAGGACATGCTCTATCTACGATGATCGGCCTTATTTTTGTCGCGTGGAGCCAGATGTATTCCAGAATTTATATGGAATCAACAAGAAGAGATTCAACAAGGAGGCTTGCAGTTGCTGTAATGACACAATCAAAGCAATTTATGGACCTGATTCAGAAGAGCTGGAGACGTTCAACAAGGCAATTCGAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65480.p1 GENE.S_Transcript_65480~~S_Transcript_65480.p1 ORF type:complete len:179 (-),score=39.09,CxxCxxCC|PF03692.11|9.8e-11,CxxCxxCC|PF03692.11|1.3e+03 S_Transcript_65480:48-584(-)
MMLQAIGIGGASGSVTSLCSVRCRANSKPSPKGKGKTVKVVKIEEGKQGNGGGFGQQKKKEPLWHCVKGCGACCKLAKDPTFATPEEIFDNPSDIQHYKSLIGADGWCIHYDKSTRTCSIYDDRPYFCRVEPDVFQNLYGINKKRFNKEACSCCNDTIKAIYGPDSEELETFNKAIRS*

Click here to download the sequence:
Link to NCBI Protein BLAST