Transcript Information: S_Transcript_65495.p1


Annotated TAIR IDAT1G34150.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12436086-12439237 | Forward length=446
E-Value2.9E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8796446813434
Replicate 24.7962585994597
Replicate 34.0564585759326
Condition 2: 8 Hour
Replicate 15.7267672207135
Replicate 25.4356153983991
Replicate 35.451623428384
Condition 3: 24 Hour
Replicate 15.5869267239371
Replicate 23.5357864607601
Replicate 35.418546624117


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65495.p1 GENE.S_Transcript_65495~~S_Transcript_65495.p1 ORF type:3prime_partial len:391 (+),score=75.11,PseudoU_synth_1|PF01416.16|6.2e-13,PseudoU_synth_1|PF01416.16|5.4e-17 S_Transcript_65495:86-1255(+)
ATGGAGGAAAACAATCCCATATCCTCCCTTCACCCCCAAATCAGTTCCCTTACTACCCGTATTAAGGAATTAGAGCTTGAGAATGCAAAATTGAAGTCCCAACTTGCCAATTGCACTTGTAGTAAGGTGGAGATACAAAGAGATTCTAATGATGTTGAGGAAACACTAGAAACTGAGGTTTTGCCAGGCAAAATTGGTAAGAGCAGGAAAACAAGGTCAAGAGACTCGGATGCCAAGAAATTGCATCATTGTCCCAAGAGATATGTTGCGCTGAAAGTCATATATTTTGGTCAGAGGTTTTATGGTTTTGCTTCAGAGGCACAAATGGAACCTACTGTTGAGTCTGAACTTTTCAAAGCTTTTGAAAAGACTAGGATGTTATTTGGTGACAAGAGGGAATCACAGTACTCAAGATGTGGTAGAACAGACAAGGGAGTTTCTGCTACTGGACAAGTCATTGCTCTATACCTGCGGTCAAATCTTAAAGCTGAGACAAGTTCTGCTCAAGTCATTTCTGAACAGTATGAAGGAGAGATTGATTATGTGAGAATACTGAATAGAGTTCTACCAAAGGATATTCGGATTATTAGTTGGTGTCCAGTTCCTATGGACTTCCATGCAAGGTTCAGCTGTTTGAGCAGGGAGTACAAATACTTCTTTTGGAGGGGAAGTCTAGATCTACATGCCATGCAGAATGCTGGCAAGAAATATCTAGGTGAGCATGACTTCAGGAACTTCTGTAAAATGGATGCAGTCAATTTGCACAACTACAAGCGGTGTGTCACATCATTTGATATAATTCCGAGCTATGAGCGATATAGAGGCAAAGAACTATGTGTCATCAAAATTAGAGGTAGTGCATTCCTGTGGCACCAGGTCCGATGTATGGTTGCTGTACTGTTTATGATTGGCCAAGGTCTGGAATCTGAAGATATTATAGATGTATTACTGGATATTGAGAGAACGCCTAGAAAGCCTCAATACATGATGGCCTCGGAAATGCCACTGGTTCTTCACTCTTGTGAATTCAGAGGTCTGCAGTTCTCCAGTTCAACAGGTGCTAGGCAGGCATTGAGAGTGCATCTTGAGAATGAATGTGAAAATCTCATACTCCAAGCTGCCATCTATCGTGAGGCTTTGGACAGTTGTTCATCTACGGAATATGGTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65495.p1 GENE.S_Transcript_65495~~S_Transcript_65495.p1 ORF type:3prime_partial len:391 (+),score=75.11,PseudoU_synth_1|PF01416.16|6.2e-13,PseudoU_synth_1|PF01416.16|5.4e-17 S_Transcript_65495:86-1255(+)
MEENNPISSLHPQISSLTTRIKELELENAKLKSQLANCTCSKVEIQRDSNDVEETLETEVLPGKIGKSRKTRSRDSDAKKLHHCPKRYVALKVIYFGQRFYGFASEAQMEPTVESELFKAFEKTRMLFGDKRESQYSRCGRTDKGVSATGQVIALYLRSNLKAETSSAQVISEQYEGEIDYVRILNRVLPKDIRIISWCPVPMDFHARFSCLSREYKYFFWRGSLDLHAMQNAGKKYLGEHDFRNFCKMDAVNLHNYKRCVTSFDIIPSYERYRGKELCVIKIRGSAFLWHQVRCMVAVLFMIGQGLESEDIIDVLLDIERTPRKPQYMMASEMPLVLHSCEFRGLQFSSSTGARQALRVHLENECENLILQAAIYREALDSCSSTEYGV

Click here to download the sequence:
Link to NCBI Protein BLAST