Transcript Information: S_Transcript_65496.p1


Annotated TAIR IDAT1G34150.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12436086-12439237 | Forward length=446
E-Value8.3E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9009286596557
Replicate 21.5759135398225
Replicate 31.756451055581
Condition 2: 8 Hour
Replicate 11.929440076312
Replicate 22.6633153142532
Replicate 34.0601614485679
Condition 3: 24 Hour
Replicate 11.3523023113225
Replicate 21.1871520349515
Replicate 31.9216795737231


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65496.p1 GENE.S_Transcript_65496~~S_Transcript_65496.p1 ORF type:3prime_partial len:210 (+),score=19.40,PseudoU_synth_1|PF01416.16|0.75,PseudoU_synth_1|PF01416.16|1.3e-12 S_Transcript_65496:136-762(+)
ATGGTTTTGCTTCAGAGGCACAAATGGAACCTACTGTTGAGTCTGAACTTTTCAAAGCTTTTGAAAAGACTAGGATGTTATTTGGTGACAAGAGGGAATCACAGTACTCAAGATGTGGTAGAACAGACAAGGGAGTTTCTGCTACTGGACAAGTCATTGCTCTATACCTGCGGTCAAATCTTAAAGCTGAGACAAGTTCTGCTCAAGTCATTTCTGAACAAAGGAGAGATTGATTATGTGAGAATACTGAATAGAGTTCTACCAAAGGATATTCGGATTATTAGTTGGTGTCCAGTTCCTATGGACTTCCATGCAAGGTTCAGCTGTTTGAGCAGGGAGTACAAATACTTCTTTTGGAGGGGCAGTCTAGATCTACAAGCCATGCAGAATGCCGGCAAGAAATTTCTAGGTGAACATGACTTCAGGAACTTCTGTAAAATGGATGCAGTCAATTTGCACAACTACAAGCGGTGTGTCACATCATTTGATATAATTCCGAGCTATGAGCGATATAGAGGCAAAGAACTATGTGTCATCAAAATTAGAGGTAGTGCATTCCTGTGGCACCAGGTCCGATGTATGGTTGCTGTACTGTTTATGATTGGCCAAGGTCTGGAATCTGAAGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65496.p1 GENE.S_Transcript_65496~~S_Transcript_65496.p1 ORF type:3prime_partial len:210 (+),score=19.40,PseudoU_synth_1|PF01416.16|0.75,PseudoU_synth_1|PF01416.16|1.3e-12 S_Transcript_65496:136-762(+)
MVLLQRHKWNLLLSLNFSKLLKRLGCYLVTRGNHSTQDVVEQTREFLLLDKSLLYTCGQILKLRQVLLKSFLNKGEIDYVRILNRVLPKDIRIISWCPVPMDFHARFSCLSREYKYFFWRGSLDLQAMQNAGKKFLGEHDFRNFCKMDAVNLHNYKRCVTSFDIIPSYERYRGKELCVIKIRGSAFLWHQVRCMVAVLFMIGQGLESED

Click here to download the sequence:
Link to NCBI Protein BLAST