Transcript Information: S_Transcript_65527.p1


Annotated TAIR IDAT4G17100.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9610164-9612513 | Reverse length=437
E-Value1E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.004693687843
Replicate 24.7446859263473
Replicate 33.1729438423399
Condition 2: 8 Hour
Replicate 12.8089895847836
Replicate 23.6083626838269
Replicate 33.0942359426586
Condition 3: 24 Hour
Replicate 15.8722805082242
Replicate 26.5188920394332
Replicate 34.0680716782445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65527.p1 GENE.S_Transcript_65527~~S_Transcript_65527.p1 ORF type:3prime_partial len:372 (+),score=111.39,XendoU|PF09412.6|7.6e-65 S_Transcript_65527:147-1259(+)
ATGGAGGGCTTAGTAAGGGGTCTGAGAAGCGTGGACATGCTTGGTGATCAGAGTGACAATGACGAGTCCCAGTACCATCATCCTAACGATGACAACAATTGTGATTTAGCTGATGATCAGCTTCGTTTTAGATCCATGTCCACCACCTGGGCCCAGGTGGTATCGGGGGAGCATCATGGTGATGTTGATGATCAAGGGGAGCATGATGATGGTGATGAGGAAGATGACGATGATCATCCAGTGAAGAATGATGATGATGACCAAGCTGAACAAGATGGTGATGATGATGACCAAGCTGAACAAGATGGTGATGATGATGAAGCTGAGAAGGATGATGATGATGATCAGGAAGAATTGGAAGAAAGCACTGGTGGTTGGAAAATTGCTCGCAAAAAGATTCATATGTGGCTAGAGAAGATACGTAAGGACCTTTGGAAACTGTACAAACGTCCACTCAGTGAGCAGGAGTATTCTGAGGAAGTCACAGATGTTGCGGAGCCATCTGAAGAGGAACTTGCTGACTACAAAATAGCCTGTGAAAAGCTTTGGGAACTCGATTTCAATCGCTTGACACCTGTAAAAGACTACGAAATTGATGTTGGCGAAGGAAAGAAAGTCTATGACACACAAGATATGGCAGATGAAAATCTATTTACATGGGTTGACGACAATGTTCTCAGAAGGCCTACATTTTCGCGTTTCTGTGCCCTCCTTGACAATTACAACCCGTATCAAGAATATGAGGAAATTGTGACTGATCAAGAGTTACAAGAACAAGCTGCATTCATAGAAGAGATCAGTAGAACAGCTCCTATTAAGTACCTTTACAAGTATCTTTCTTGCAACGGACTTTTCACTGAGGATTACCAGGAATTCAAAACCACTTTGATAGATCTCTGGTTCACTCTTTATGATCGAGGTGGTACCTCTGACTCCTCTTCTCCATTTGAGCATGTGTTTGTCGGAGAAATCAAGAGCCGCGGGGAACAAGAAGTTTCAGGCTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCAAATGGTGGCATTAACTATCAAGGTTACATCTTGCCTCGCAGACATCAGGAATTTCCAGATGCCGAGACACAACTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65527.p1 GENE.S_Transcript_65527~~S_Transcript_65527.p1 ORF type:3prime_partial len:372 (+),score=111.39,XendoU|PF09412.6|7.6e-65 S_Transcript_65527:147-1259(+)
MEGLVRGLRSVDMLGDQSDNDESQYHHPNDDNNCDLADDQLRFRSMSTTWAQVVSGEHHGDVDDQGEHDDGDEEDDDDHPVKNDDDDQAEQDGDDDDQAEQDGDDDEAEKDDDDDQEELEESTGGWKIARKKIHMWLEKIRKDLWKLYKRPLSEQEYSEEVTDVAEPSEEELADYKIACEKLWELDFNRLTPVKDYEIDVGEGKKVYDTQDMADENLFTWVDDNVLRRPTFSRFCALLDNYNPYQEYEEIVTDQELQEQAAFIEEISRTAPIKYLYKYLSCNGLFTEDYQEFKTTLIDLWFTLYDRGGTSDSSSPFEHVFVGEIKSRGEQEVSGFHNWLQFYLEEANGGINYQGYILPRRHQEFPDAETQL

Click here to download the sequence:
Link to NCBI Protein BLAST