Transcript Information: S_Transcript_6553.p1


Annotated TAIR IDAT5G54165.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21984620-21984868 | Forward length=82
E-Value1.8E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.800566667813
Replicate 278.202759025647
Replicate 380.52719418681
Condition 2: 8 Hour
Replicate 121.747675273908
Replicate 230.345972907352
Replicate 326.803095503293
Condition 3: 24 Hour
Replicate 144.987482832115
Replicate 241.288528020276
Replicate 342.452946028413


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6553.p1 GENE.S_Transcript_6553~~S_Transcript_6553.p1 ORF type:complete len:101 (+),score=18.84 S_Transcript_6553:228-530(+)
ATGATGTCGCTATTCAGTTCCTTCGATGCCATGTATGCTGAATCTTCTGGCTTCAATCTCAATGGCTACTTCTCTCGTTCTTCCAACCAATTCGACCGGAAAACTTCACCGTCACCGTCGATTTCCGGTGGCGATCATGTTTTGAAGAAAGCGAATTCAAATTCTTCTTCTTCTTTACCGGTGAAGAAAGAAAGCGAGAATTTGAAGAACAAGACGACGATGCCGTCAAAGAAGAAGAGAAATCCTAGGTTTGCGGTGGAGCTTGATGGCGTTCATTGCTTCGAAACTATTCTTCCTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6553.p1 GENE.S_Transcript_6553~~S_Transcript_6553.p1 ORF type:complete len:101 (+),score=18.84 S_Transcript_6553:228-530(+)
MMSLFSSFDAMYAESSGFNLNGYFSRSSNQFDRKTSPSPSISGGDHVLKKANSNSSSSLPVKKESENLKNKTTMPSKKKRNPRFAVELDGVHCFETILPF*

Click here to download the sequence:
Link to NCBI Protein BLAST