Transcript Information: S_Transcript_65626.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6961745043357
Replicate 26.1918151338832
Replicate 35.592313522124
Condition 2: 8 Hour
Replicate 18.1861982185123
Replicate 210.392084529421
Replicate 39.6952726203302
Condition 3: 24 Hour
Replicate 15.6373892878953
Replicate 25.7025074288874
Replicate 35.2884931817179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_65626.p1 GENE.S_Transcript_65626~~S_Transcript_65626.p1 ORF type:complete len:310 (+),score=17.64,PIF1|PF05970.10|4.9e-24 S_Transcript_65626:3698-4627(+)
ATGAACTGGTTGATGCTAGCCTGGTTAGCTCCTATTTGTGGCCTCTATTCCATCGCTTCACACTTGTTGAAAACATGCGCACTAAAGAAGATCCTGATTTCACTGCATTCCTTCTTAAGCTTGGCAATGGTGAACTCCAGACAAATGAGCAGGAGGCTATTACACTGCCTCCCTCACTTCTGTGTAAACTCCCAAGAACCGAACACTGCTTGGACTATCTTGTTGCTTCAGTCTACCCAGACATACAATGAACTATCTACTAATCCTCATGCATTCACTGCACAAGCAACTTTAACTCCAACAAACGATGAAGTCGACTGCATCAACAAGCTTGTCATAGACAAATTCCCAGGAGAAGCATATGTGTACAAAAGCTATGACACTACCATAGATGATGATTGCAATGCTCATCCGGTTGAGTTTCTCAACACACTCTGTCCAGGAGGCATGAGTCCCCACAATCTAATACTAAAGCTTAATTGCCCAGTCATACTGCTGCGAAATCTTAACCCATCCATTGGCCTGTGTAATGGAACAAGACTCATTTGTAGAGGATTCAAGTGCAATGTTATCATTTGTGAGATTGCAACAGGCTATCGAAGTGGTGAATATGTCTTCATACCGCGCATAAGTCTGAGGCCCTCGGCTTCCATCACATATCCATACAAGTTTGAAAGGCTCCAATTCCCAATCAAATTATGCTTTGTAATGACGATTAACAAATCCCAAGGGCAGACCCTAACAGATGTTGCAGTTTACCTAAGCAGACAATGCTTCTCGCATGGGCAGCTGTATGTTGCTCTATCTAGAGCTAAGAAAGCTAGAAGCGTGAAGGTTTTCATCAAAGAAGATCAGATAGATGATTCAGTGCCACCCTCTGTCTCTAATGTAGTATCGTTTGACCTGCTGAGAAAGGCTGGGATACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_65626.p1 GENE.S_Transcript_65626~~S_Transcript_65626.p1 ORF type:complete len:310 (+),score=17.64,PIF1|PF05970.10|4.9e-24 S_Transcript_65626:3698-4627(+)
MNWLMLAWLAPICGLYSIASHLLKTCALKKILISLHSFLSLAMVNSRQMSRRLLHCLPHFCVNSQEPNTAWTILLLQSTQTYNELSTNPHAFTAQATLTPTNDEVDCINKLVIDKFPGEAYVYKSYDTTIDDDCNAHPVEFLNTLCPGGMSPHNLILKLNCPVILLRNLNPSIGLCNGTRLICRGFKCNVIICEIATGYRSGEYVFIPRISLRPSASITYPYKFERLQFPIKLCFVMTINKSQGQTLTDVAVYLSRQCFSHGQLYVALSRAKKARSVKVFIKEDQIDDSVPPSVSNVVSFDLLRKAGIL*

Click here to download the sequence:
Link to NCBI Protein BLAST