Transcript Information: S_Transcript_6579.p2


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value3.8E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9839003705541
Replicate 223.717498774328
Replicate 34.3801498198551
Condition 2: 8 Hour
Replicate 13.1988085475699
Replicate 20.27964810799658
Replicate 34.5296176160585
Condition 3: 24 Hour
Replicate 10
Replicate 220.397430418713
Replicate 34.0985822158314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6579.p2 GENE.S_Transcript_6579~~S_Transcript_6579.p2 ORF type:5prime_partial len:80 (+),score=-11.74,Chloroa_b-bind|PF00504.17|4.4e-17 S_Transcript_6579:1-240(+)
CCCCTCTACCCCGGTGAGAGCTTTGACCCGCTCGGCCTCGCGGACGACCCCGACAGCTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAACGGCCGCCTCGCGATGTTCTCGATGTTCGGCTTCTTCGTGCAGGCCATCGTGACCGGCAAGGGCCCGATCGAGAACTGGGCGGAGCACGTCGCGGACCCCTTCGCGGTCAACGCGTGGAACTACGCCACCAAGTTCGTGCCCGGCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6579.p2 GENE.S_Transcript_6579~~S_Transcript_6579.p2 ORF type:5prime_partial len:80 (+),score=-11.74,Chloroa_b-bind|PF00504.17|4.4e-17 S_Transcript_6579:1-240(+)
PLYPGESFDPLGLADDPDSFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENWAEHVADPFAVNAWNYATKFVPGK*

Click here to download the sequence:
Link to NCBI Protein BLAST