Transcript Information: S_Transcript_6581.p3


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value5.5E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9405313400652
Replicate 23.9069523174766
Replicate 30.57633550261252
Condition 2: 8 Hour
Replicate 11.3328368948208
Replicate 20
Replicate 30.88816031687422
Condition 3: 24 Hour
Replicate 10
Replicate 27.0824411176086
Replicate 31.5763777753198


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6581.p3 GENE.S_Transcript_6581~~S_Transcript_6581.p3 ORF type:5prime_partial len:96 (+),score=-11.78,Chloroa_b-bind|PF00504.17|1e-18 S_Transcript_6581:2-289(+)
ATCGAGGGCTACCGCGTCAACGGCGGCCCCGCCGGCGAGGGCCTCGACCCCCTCTACCCCGGTGAGAGCTTCGACCCGCTCGGCCTCGCCGACGACCCCGACACGTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAACGGCCGCCTCGCGATGTTCTCGATGTTCGGCTTCTTCGTGCAGGCCATCGTGACTGGCAAGGGCCCCATCCAGAACTGGTCTGAGCACGTCGCAGACCCCTTCGCCAACAACGCATGGAACTACGCCACCAAGTTCGTGCCCGGCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6581.p3 GENE.S_Transcript_6581~~S_Transcript_6581.p3 ORF type:5prime_partial len:96 (+),score=-11.78,Chloroa_b-bind|PF00504.17|1e-18 S_Transcript_6581:2-289(+)
IEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNWSEHVADPFANNAWNYATKFVPGK*

Click here to download the sequence:
Link to NCBI Protein BLAST