Transcript Information: S_Transcript_6585.p2


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value1.8E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1570870102252
Replicate 22.2062789557515
Replicate 30.56130066341393
Condition 2: 8 Hour
Replicate 10.092719088335361
Replicate 20
Replicate 30.092677598282528
Condition 3: 24 Hour
Replicate 10
Replicate 23.0546876472468
Replicate 30.32898318789282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6585.p2 GENE.S_Transcript_6585~~S_Transcript_6585.p2 ORF type:3prime_partial len:230 (+),score=-29.61,Chloroa_b-bind|PF00504.17|2.9e-50 S_Transcript_6585:75-761(+)
ATGTCTTTCGCCGGCAGCGTCAAGGGCCTCCGCGGCAAGAATGTCGCCTCCACCGGCCTGAAGTGCCATGCGCAGATGCGCCGCACCAGCAAGGGCAAGTCCCCCGGTGGCAGCAGCGCCGCTGTGTGGTACGGCCCCGACCGCCCCCTCTTCCTGGGCCCGTTCTCCGACGACGCCGTGCCACCGTACCTCAACGGTGAGTTCCCCGGCGACTACGGCTGGGACACCGCGGGCCTGTCCGCCGACCCCGAGACCTTCCGGCAGTACCGCGAGATCGAGCTCATCCACGCCCGGTGGGCCATGCTCGGCGCCCTCGGCTGCGTGACGCCCGAGATCCTCTCCAAGTACAACGGCGTCAAGTTCGGCGAGTCCGTGTGGTTCAAGGCCGGCGCGCAGATCTTCCAGCGCGATGGCCTGAACTACCTCGGCAACCCGAGCCTCATCCACGCGCAGAGCATCCTCGCCGTCCTCGCCACCCAGGTGGTGCTCATGGGCCTGATCGAGGGCTACCGCGTCAACGGTGGCCCCGCCGGCGAGGGCCTCGACCCCCTCTACCCCGGTGAGAGCTTTGACCCGCTCGGCCTCGCGGACGACCCCGACAGCTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAACGGCCGCCTCGCGATGTTCTCGATGTTCGGCTTCTTCGTGCAGGCCATCGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6585.p2 GENE.S_Transcript_6585~~S_Transcript_6585.p2 ORF type:3prime_partial len:230 (+),score=-29.61,Chloroa_b-bind|PF00504.17|2.9e-50 S_Transcript_6585:75-761(+)
MSFAGSVKGLRGKNVASTGLKCHAQMRRTSKGKSPGGSSAAVWYGPDRPLFLGPFSDDAVPPYLNGEFPGDYGWDTAGLSADPETFRQYREIELIHARWAMLGALGCVTPEILSKYNGVKFGESVWFKAGAQIFQRDGLNYLGNPSLIHAQSILAVLATQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDSFAELKVKEIKNGRLAMFSMFGFFVQAIV

Click here to download the sequence:
Link to NCBI Protein BLAST