Transcript Information: S_Transcript_66084.p2


Annotated TAIR IDAT3G42860.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:14946458-14948097 | Reverse length=372
E-Value1.3E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1075456916003
Replicate 26.0914099115024
Replicate 34.2846760598264
Condition 2: 8 Hour
Replicate 13.3029224060206
Replicate 23.9922827538906
Replicate 34.3062318393902
Condition 3: 24 Hour
Replicate 14.92797034973
Replicate 23.2812925851277
Replicate 34.161212713302


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66084.p2 GENE.S_Transcript_66084~~S_Transcript_66084.p2 ORF type:complete len:297 (+),score=53.77,zf-CCHC|PF00098.19|3.8e-08,zf-CCHC|PF00098.19|1.4e-08,zf-CCHC|PF00098.19|3.1e-07,zf-GRF|PF06839.8|2e-13,zf-CCHC_3|PF13917.2|6.3e-05,zf-CCHC_3|PF13917.2|0.00044,zf-CCHC_3|PF13917.2|0.12,zf-CCHC_5|PF14787.2|1.3e+03,zf-CCHC_5|PF14787.2|0.0099,zf-CCHC_5|PF14787.2|0.016,zf-CCHC_5|PF14787.2|0.015,zf-CCHC_2|PF13696.2|0.017,zf-CCHC_2|PF13696.2|0.055,zf-CCHC_2|PF13696.2|0.59 S_Transcript_66084:2482-3372(+)
ATGGCGAACCAGAAATCGGGAGTGGTACAAATTCTCGACGATGATGAAGTGGACGTGTCATTTCTATCGGAGCTGGATGAAGTCGAAGCTCAAGCCCTCTCCTCCCTTTCAAAACGCCGTCGTATCATGGAGGAGGGGGCTTACATGGCGGCTCTGAAAGGGAGCAAGAGTCTGACGTGGCAGTCCCAGTCTGAAACCCAGACCTTCGCCTCCGTTGGCGGTGGCGGTGGCGGTGGTGCGTGTTTCAAGTGCGGGAACGAAGGTCACTGGGCCAGAGAATGCCCCCAAACGACGTCGTCAGGGATGGGACCCTCACGGCCGACGTCATCATTGTCGTCGTCGCCGATGGGTCCTACGCCGGAGAAGGGGTGTTCATGTGGAATGGGGAATTGCTTGCTTCTAACTGCTAACACTGAGCGTAACCGGGGTCGTAAGTTCTTCCGATGTCCTCTTCGCCAGGAAAATGGTGGTTGTGGTTTTTTTGAGTGGTGTGATGACTCCTCTGGAAATCAGTTTTCTGCTCAAGAGCGGCCTTGGAGAAATGGAAGCCAGGAGCAGTTTTACAACCATCCTACTAACCAGGGAATTGCTGGTTCTCCAAAACCATGGAATGATTACGATAAAGGAACGAATTTTACGAATTCAAACTATGGAGCTGCTCAGAAGTTTGAAACCACTGACAACAAAGGCTACAGCATGAGAGCAGGTTCCTCCTGCTTCAAGTGTGGGGAGGAAGGGCACTGGGCAAGAGAGTGCCCCGCTCCTTCATCAAATGCAACTGCCAGTGTGAGAGGAAAAACATCCTCTGATACTTGCTTTAAGTGTGGTGGATCTGGTCACTGGGCAAAGGATTGCTCACAAGGTCAAAATGTGAAGCTCCACAACCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66084.p2 GENE.S_Transcript_66084~~S_Transcript_66084.p2 ORF type:complete len:297 (+),score=53.77,zf-CCHC|PF00098.19|3.8e-08,zf-CCHC|PF00098.19|1.4e-08,zf-CCHC|PF00098.19|3.1e-07,zf-GRF|PF06839.8|2e-13,zf-CCHC_3|PF13917.2|6.3e-05,zf-CCHC_3|PF13917.2|0.00044,zf-CCHC_3|PF13917.2|0.12,zf-CCHC_5|PF14787.2|1.3e+03,zf-CCHC_5|PF14787.2|0.0099,zf-CCHC_5|PF14787.2|0.016,zf-CCHC_5|PF14787.2|0.015,zf-CCHC_2|PF13696.2|0.017,zf-CCHC_2|PF13696.2|0.055,zf-CCHC_2|PF13696.2|0.59 S_Transcript_66084:2482-3372(+)
MANQKSGVVQILDDDEVDVSFLSELDEVEAQALSSLSKRRRIMEEGAYMAALKGSKSLTWQSQSETQTFASVGGGGGGGACFKCGNEGHWARECPQTTSSGMGPSRPTSSLSSSPMGPTPEKGCSCGMGNCLLLTANTERNRGRKFFRCPLRQENGGCGFFEWCDDSSGNQFSAQERPWRNGSQEQFYNHPTNQGIAGSPKPWNDYDKGTNFTNSNYGAAQKFETTDNKGYSMRAGSSCFKCGEEGHWARECPAPSSNATASVRGKTSSDTCFKCGGSGHWAKDCSQGQNVKLHNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST